Flaviramulus sp. BrNp1-15: MBM09_11060
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Entry
MBM09_11060 CDS
T07901
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sabu
Flaviramulus sp. BrNp1-15
Pathway
sabu00260
Glycine, serine and threonine metabolism
sabu00460
Cyanoamino acid metabolism
sabu00630
Glyoxylate and dicarboxylate metabolism
sabu00670
One carbon pool by folate
sabu00680
Methane metabolism
sabu01100
Metabolic pathways
sabu01110
Biosynthesis of secondary metabolites
sabu01120
Microbial metabolism in diverse environments
sabu01200
Carbon metabolism
sabu01230
Biosynthesis of amino acids
sabu01240
Biosynthesis of cofactors
sabu04981
Folate transport and metabolism
Module
sabu_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sabu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MBM09_11060
09102 Energy metabolism
00680 Methane metabolism
MBM09_11060
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MBM09_11060
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
MBM09_11060
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
MBM09_11060
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
MBM09_11060
Enzymes [BR:
sabu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
MBM09_11060
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ULC58459
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Position
complement(2522962..2524233)
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AA seq
423 aa
AA seq
DB search
MQRDEQIFELIKAEKERQLHGIELIASENFVSNQVMEAAGSVLTNKYAEGYPGKRYYGGC
EVVDEVEQIAIDRAKTLFGAAYVNVQPHSGSQANTAVYHACLKPGDKILGFDLSHGGHLT
HGSPVNFSGKLYVPSFYGVEQETGVLNYDKIQEIATKEQPKLIIAGASAYSRDIDFKRFR
EIADSVGAILLADISHPAGLIAKGILNDPLPHCHIVTTTTHKTLRGPRGGMIMMGQDFDN
PFGIKLKNGNLRKMSSLLDSAVFPGNQGGPLEHIIAAKAIAFGEALTDEFLHYQLQVKKN
ANAMAEALVAKDYHIISGGTDNHMMLIDLRNKNVSGKDAEQALVKADITANKNMVPFDDK
SPFVTSGIRLGTAAVTTRGLKEADMVAIVELIDEVITNFDNEATLEAVKEKVNAMMKNKP
LFV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgacgaacaaatttttgaacttattaaagctgaaaaagaacgccaactacat
ggtattgaacttatagcatcagagaattttgtaagcaatcaagttatggaggctgcaggt
tctgttcttactaataaatatgcagaaggttaccctggaaagcgttattatggaggttgt
gaagttgttgatgaagtagagcaaatagctattgatagagcaaaaacattgtttggggca
gcttatgtaaacgttcaacctcactctggaagtcaggcaaacacagcggtttatcacgca
tgtttaaagccgggtgataaaattttaggtttcgatttgtctcatggtggtcatttaaca
catgggtcgccagtaaatttctcaggtaaattatatgtaccctctttttacggtgtagag
caggagacaggtgttttaaattatgataaaatacaagagattgctacaaaagaacaacct
aaattaattattgcaggcgcatctgcttattctcgcgatattgattttaaacgttttaga
gagattgcagatagcgttggagctatattacttgcagatatttcgcatcctgcaggatta
attgctaaaggaattttaaacgatccgcttcctcattgtcatatcgttactacaacaact
cacaagactttaagaggtccaagaggaggaatgattatgatgggacaagattttgataac
ccgtttggtataaaattaaagaacggaaacttacgtaaaatgtcgtcgttgttagattcc
gcggttttccctgggaatcaaggtggacctttagagcacattattgctgctaaagcaatt
gcttttggagaagctttaactgatgaatttttacattatcaattacaagtgaagaaaaat
gccaatgctatggcagaagcgctagttgcaaaagactaccatattatttctggtggaaca
gataaccacatgatgttaattgatcttcgtaataaaaatgtgtctggaaaggacgctgaa
caagctcttgtaaaagcagatattacagcaaataaaaatatggtgccttttgatgataaa
tcgccatttgtaacctcaggaattcgtttaggaactgcagcagttactacacgtggttta
aaagaggcagacatggttgcgattgtagaattaattgatgaagtaataactaactttgat
aatgaagctactctagaagctgtaaaagaaaaagtaaatgcaatgatgaaaaacaaaccg
ttgtttgtttaa
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