Flaviramulus sp. BrNp1-15: MBM09_12135
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Entry
MBM09_12135 CDS
T07901
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sabu
Flaviramulus sp. BrNp1-15
Pathway
sabu03030
DNA replication
sabu03430
Mismatch repair
sabu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sabu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MBM09_12135
03430 Mismatch repair
MBM09_12135
03440 Homologous recombination
MBM09_12135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sabu03032
]
MBM09_12135
03400 DNA repair and recombination proteins [BR:
sabu03400
]
MBM09_12135
Enzymes [BR:
sabu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MBM09_12135
DNA replication proteins [BR:
sabu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MBM09_12135
DNA repair and recombination proteins [BR:
sabu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MBM09_12135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
DEDDh_C
DUF7508
DUF3218
Motif
Other DBs
NCBI-ProteinID:
ULC58668
LinkDB
All DBs
Position
complement(2745040..2746377)
Genome browser
AA seq
445 aa
AA seq
DB search
MIYTIIDVETTGRSNKLTEISIFKYDGTQIIDEFTSLINPELLIPDYITALTGIDNGMVA
DAPTFSEIANTILSFTENCIFVAHNVNFDYNAIRNEFKAINIDFNRKKLCTIRLARKLIP
GHKSYSLGKLSNALDIHIVDRHRARGDAEATVILFERLLSQEQAETVFNEFLKKSSKEAT
LPSHLPTAVFNNLPNTPGVYYFKNKKGKIIYVGKAKDIKKRVLSHFYSKTKKSLAMCRET
AHIDFALSGTELIALLMEDAAIKQHYPEYNQVAKRATKMYAIFSYTDRKGIIHMAYNTLK
ATPNPILTLNSITECRQHIEQLCSQFELCPKYCHLQEAVASCNHFKIHTCKGICKDQEPY
EQYNQRVLQAIDSLNNNSKDVVLKQKGRHAQEDAFIMIEKGTYLGYGFIDKTEHINNTQD
LEPFLIPQKDNNDIQKIIRKVLVNL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgatttacacgattatagatgttgaaaccacaggaagaagtaataagcttaccgaaata
tctatttttaagtatgatggtactcaaattatagatgagtttacctctttaattaatccg
gagctattaattccagattatattactgcgcttacaggtattgataatggtatggttgct
gatgctcctacattttctgaaatcgccaacaccattttatcttttaccgaaaactgcatt
tttgtagcacataatgtaaatttcgattacaacgctattagaaatgaatttaaagccata
aatatagattttaacagaaaaaaattgtgtaccatacggttagctagaaaactgattcct
ggacataaatcgtatagtttaggaaaacttagtaatgctttagatattcatattgttgac
cgacaccgggctagaggcgatgctgaagctaccgttattttgtttgagcgcttacttagt
caagaacaagcggaaacggtatttaatgagtttttaaaaaaatcatctaaagaagcgaca
ttaccatcacatttaccaacggcggtttttaataatttaccaaacacacctggtgtgtat
tattttaaaaacaaaaagggtaaaattatttatgttggtaaagctaaagacataaaaaag
cgtgtactaagtcatttttatagtaaaactaagaaatctttggctatgtgtagagagact
gcccatatagactttgcactttctggtaccgaacttatagcgttacttatggaagatgct
gccattaaacagcattacccagaatacaaccaagtggcaaaacgtgccacgaaaatgtat
gctatttttagttataccgaccgaaaaggcattatacatatggcatataatacacttaaa
gccacaccaaacccaatactgactttaaactctataaccgaatgccgccaacatatagaa
cagttgtgtagccagtttgaactctgcccaaaatattgccatttacaagaagctgttgcc
agctgcaaccattttaaaatacatacctgtaaaggcatttgtaaagaccaagaaccttat
gagcagtataaccaacgcgtgttacaagctatagacagcctaaataacaacagtaaagat
gttgttttaaaacaaaaaggcagacacgcccaagaagatgcctttattatgattgaaaaa
ggtacctatttaggttatggttttatagataaaacagaacacattaataacacccaagat
ttagaaccttttttaataccgcaaaaggataataacgatattcaaaagataattagaaag
gtgttagttaatttataa
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