Flaviramulus sp. BrNp1-15: MBM09_14385
Help
Entry
MBM09_14385 CDS
T07901
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
sabu
Flaviramulus sp. BrNp1-15
Pathway
sabu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sabu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MBM09_14385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sabu03019
]
MBM09_14385
Enzymes [BR:
sabu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MBM09_14385
Messenger RNA biogenesis [BR:
sabu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MBM09_14385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
Fe-ADH
P-loop_SecA
AAA_22
Shikimate_DH
CMS1
Motif
Other DBs
NCBI-ProteinID:
ULC59089
LinkDB
All DBs
Position
complement(3246284..3247567)
Genome browser
AA seq
427 aa
AA seq
DB search
MSFQSLGLSEALLKAVSKKGYTTPSPIQQKAIPSILEGKDVLASAQTGTGKTAGFTLPLL
HLLSENPKQKFRPIRALILTPTRELAAQVYANVREYSEFLNLRSAVIFGGVNQKPQVATI
RQGVDILVATPGRLLDLQNQGLLSLKRVEILVLDEADRMLDMGFLRDIERIISSMPEKRQ
NLMFSATFSKDIKKLAHGILNHPIQVEATPENTTVDAINQKVYRVAKGLKTNLIIKLISD
GNWKQVLVFTRTKHGANKLCEKMEKAGIKAAAIHGNKSQGARTKALAGFKSGSVSVLVAT
DIAARGLDIPLLPHVVNFELPNISEDYVHRIGRTGRAGASGEALSLVSADETTYLRDIEK
LIEMKLPVEIVEGFEPDPNASTVPIKLGQGRQNRSPRNKSNNSGNSKRNSNRNNKSRRPK
RNNDRRN
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttcaatctctaggcttatctgaagccttgctaaaagcagttagcaaaaaagga
tacacaacaccatcacctatacagcaaaaagcaattccttcaattttagaaggaaaagat
gttttagcatctgcgcaaactggaacaggaaaaaccgcaggtttcacattgcctcttttg
catttgctttctgaaaatcctaaacaaaaatttagacctattcgtgctttaattttaaca
ccaactcgtgagttagctgcacaagtttatgcgaatgttagagaatacagtgagttttta
aatttaagaagtgctgttatttttggaggtgtaaaccaaaaaccacaagttgccactatt
agacaaggtgtagatattttagtagccactcctgggcgcttattagatttacaaaaccaa
ggactattatcgctaaaacgagttgaaatactggttttagatgaagctgatagaatgcta
gatatgggttttttaagagatattgaacgcattataagctcgatgccagaaaagcgtcag
aacttaatgttttcggctacgttttcaaaagatataaaaaaactggcgcatggtatttta
aatcatcctatacaagttgaagccactccagaaaacacaactgttgatgccattaaccaa
aaagtatatagagttgccaaaggcttaaaaacaaatttaatcattaagttaatctctgat
ggtaactggaagcaagttttagtgtttacaagaacaaaacatggagcaaacaagctttgt
gaaaaaatggaaaaagcaggaattaaagctgctgccatacacggaaataaaagccaagga
gctagaacaaaagctttggcaggttttaaaagtggaagtgtgagtgttttggtggctacc
gatattgctgcacgtggattagacattccattattacctcatgttgttaattttgagtta
cctaatatttctgaagattatgtacatagaattggtagaacgggtagagccggagccagt
ggtgaagctttatctttggtgagtgcagatgaaaccacctatttgcgtgatattgaaaag
ctaattgaaatgaaacttcctgttgaaattgttgaaggttttgaaccagatcctaacgcc
tcaacagtaccaattaaactaggtcaaggaagacaaaatagaagtcctcgaaacaagtct
aataattctgggaattctaagagaaactccaatagaaataataaatcgagacgtccaaaa
cgtaataatgatagacgtaattaa
DBGET
integrated database retrieval system
