KEGG   Saccharibacillus brassicae: FFV09_01700
Entry
FFV09_01700       CDS       T06082                                 
Symbol
cas8c
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
saca  Saccharibacillus brassicae
Brite
KEGG Orthology (KO) [BR:saca00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:saca02048]
    FFV09_01700 (cas8c)
Prokaryotic defense system [BR:saca02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    FFV09_01700 (cas8c)
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: QDH19688
UniProt: A0A4Y6USR2
LinkDB
Position
complement(408947..410956)
AA seq 669 aa
MIVQSLYERYEQLLQDKNSGMSKPGYSSDKVSFVLEIDEDGEVRKIVDIRVQQGKKVVPL
RMKVPEHPVRTSGIKPFFLSDKAEYVLGIRADKTNGIEVSPAKYASSADLHKRLLNASHE
PEARAIVAFYEKWNPQAMILPDSALHAELLRIVGTTDNNLVFQLAGAERYIHESPEVLRE
WDSAIAQAEAGSEAILGNCLVTGLENQPIAKVHKVNIKGVLNAQSSGASIVSFNFASLES
YGKKQSYNAPFSEAASVGYAKALNHLILSERNRLRRMGDMTVVFWAQRLPGEAEAEWDLQ
EGLFGAFFDGPFGASSAGSEQVRPESDHSAESAAEMEEPPAEPIEASVGEENRELTRQIE
DLLGRVKNADTVTADMLPAKDASFYVLGLSGNNARLAVRFFWQSSFEELFQKLSLYASDM
AMGRPGNHRADLPTLFNIMLQTVRQTGDLSKMRQNISGSMESEWFRAMLGGGLLPYSVFS
AVVNRARIDGQMSPYGEQGRSAWIRASVIKAYLVRYARIHQQNEFKEALTPMLNEEAQSV
AYRLGRLFAVLERAQTDAAGGPGRLNATIKDRYFGSASATPAAVFPILLRLAQHHMAKAE
YGRFRDRDIAGILQGVDAFPNHLDLKQQGLFMLGYYHQTAYRAPAKTEETSAPTVESEAS
ATIETEAAK
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgatcgtgcaatcgctctatgaacggtacgaacaactgctgcaggacaaaaattcggga
atgtccaagccgggatacagttccgacaaagtttcttttgtcttggaaatcgatgaagac
ggcgaagtgcgaaaaatcgtcgatattcgtgtgcagcaggggaaaaaggtcgtaccgctg
cgtatgaaggtgccggaacacccggtgcgtacaagcggaatcaagcctttttttctgtcg
gacaaagcggaatacgtactcggcattcgggcggacaagacgaacggaatcgaagtttcg
cccgctaaatatgccagcagcgccgatttgcataaacggttgttgaatgcttcgcatgaa
ccggaagcgcgcgcgatcgttgctttttatgaaaagtggaacccgcaggcgatgattctt
cccgattcggcgctgcacgccgaactgctgcgaatcgtcggtacgaccgacaataatctc
gttttccagttggcgggcgcagagcggtatatacacgaaagtcccgaagtgctgcgcgag
tgggattcggcgattgcgcaggcggaagccggcagcgaggcgatccttggtaattgcctg
gttacgggacttgagaatcaaccgatcgccaaagtacacaaagtaaacatcaaaggggtc
cttaacgcgcagtcgtcgggagcgagcatcgtgtcttttaactttgcgtcgctggagtct
tacgggaaaaagcaaagctataacgctccgttcagcgaagccgcctctgtcggttatgcc
aaagcgctcaatcatctgattttgtccgaacgcaatcgcctgcgccggatgggcgatatg
acggtcgtcttctgggcacagcgtcttccgggcgaagccgaagcagaatgggacttgcaa
gaagggctgttcggagcgttcttcgacggaccattcggtgcctcttcggccggcagcgaa
caggttcggccggaatccgatcattcggcagaaagtgcagctgaaatggaggagccgccc
gcagagccgatcgaagcttctgtaggcgaagaaaatcgggaactgactcgccaaatcgaa
gatttgctcgggcgtgtaaaaaatgcggatacggtaactgccgacatgctgcctgccaaa
gacgcttcgttttacgtgcttggcctgtccggcaacaatgctcggctggcggtacgcttt
ttctggcagagttcgttcgaagaattatttcaaaagttaagtctgtatgcgtcagatatg
gccatgggacgtccgggcaatcatcgggccgatctgccgacgttattcaacatcatgctt
cagacggtacggcagacgggcgatctatccaaaatgcggcaaaacatttcgggctccatg
gaaagcgagtggttccgggcgatgttgggcggcggattgctgccctactccgtattctct
gcggttgtgaaccgcgcccgcatcgacggacagatgtccccttacggcgaacaggggcga
agtgcctggatccgggcttccgtcatcaaagcctatctggtccgttacgcgcgtattcat
caacaaaacgaattcaaggaggccttgacgcctatgttaaatgaagaagctcaatcggtg
gcctaccggctcggcagattgttcgccgtcctggaacgggcgcaaacggatgcggccggc
ggtcccggtcgcctgaatgcgacaatcaaggatcgttacttcggctcggcttcggcgact
cccgctgcggtatttccgattctgcttcgccttgcgcagcatcacatggccaaagccgag
tacgggcgtttccgcgatcgggatattgccggcattttgcaaggggtagatgcttttccg
aatcatctggatctcaagcagcaggggttgttcatgctgggctattatcatcaaacggct
tatcgggctccggccaaaactgaagagacgtccgcgccaacggttgaatccgaagcgtcg
gcgacaatcgaaacggaggcagcgaaatga

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