Saccharibacillus brassicae: FFV09_07030
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Entry
FFV09_07030 CDS
T06082
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
saca
Saccharibacillus brassicae
Brite
KEGG Orthology (KO) [BR:
saca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saca03021
]
FFV09_07030
Transcription machinery [BR:
saca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FFV09_07030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Sigma70_r2
HTH_23
GerE
HTH_Tnp_ISL3
HTH_38
Sigma70_ECF
HTH_50
HTH_28
KORA
HTH_29
HTH_10
HTH_24
MarR_2
HTH_3
MarR
TnsD
Phage_antitermQ
HTH_31
DUF1492
CENP-B_N
Lipocalin_7
Motif
Other DBs
NCBI-ProteinID:
QDH20624
UniProt:
A0A4Y6UU31
LinkDB
All DBs
Position
complement(1684829..1685602)
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AA seq
257 aa
AA seq
DB search
MNDKVTPPESMSEAVSLIWEYQQTKDNEIATVLIKKYEPMVKMAAGKIARNRPDLYEDLY
QVGQMALIRLLQQYDIQLGIPFEPYAMKSMIGHMKNFLRDKSWYIQVPRRIKEKGALVQQ
AIDELTVRLERSPDVKEIAQYLDLSVEETVEVLAGRECYHYVSLDSPLSQEESAATLGEL
ISSDVNDYDTVERRMDLQQALSQLKEQEQKVLLLAFQEGQSQRAIAQKLGVSQMSVSRIQ
KRATEKLKQIMSNSSSL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaacgataaagtgaccccgcctgaatccatgtcggaagcggtatccttgatctgggaa
tatcaacagaccaaggataacgaaatcgccacggtgctcatcaaaaagtacgagccgatg
gtcaagatggccgcaggcaagattgccagaaaccggcccgatctttatgaagacttgtat
caggttggtcaaatggcgttaatccgcctgcttcaacagtacgatatccaattgggaatt
ccttttgagccctatgcgatgaagagcatgatcgggcatatgaagaactttttgcgcgat
aaatcctggtacattcaagtgccaagaagaatcaaggaaaaaggagcgcttgtccaacaa
gcgatcgacgaactgaccgttcggttggagcgttctcccgatgtcaaggaaatcgcgcag
tatctggacctcagcgtagaagaaacggtcgaagtgctggccgggcgcgaatgttaccat
tacgtgtccctggattctcccctgtcccaggaagagagtgcggcgacgctcggcgagctg
atcagttcggacgtgaacgattacgatacggtcgaacggcgcatggaccttcagcaggcg
ttgagccaactgaaggaacaggagcagaaagtgctgctgctggccttccaggaaggacaa
tcgcagcgggcgatcgctcagaagctgggtgtgtcccagatgagcgtatcccggattcag
aagcgagcgaccgagaaactcaaacagatcatgtccaattcttcttcgttatga
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