Saccharibacillus brassicae: FFV09_07560
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Entry
FFV09_07560 CDS
T06082
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
saca
Saccharibacillus brassicae
Pathway
saca03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
saca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FFV09_07560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saca03021
]
FFV09_07560
03400 DNA repair and recombination proteins [BR:
saca03400
]
FFV09_07560
Enzymes [BR:
saca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FFV09_07560
Transcription machinery [BR:
saca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FFV09_07560
DNA repair and recombination proteins [BR:
saca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FFV09_07560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
RAD51D_N
OPA3
Motif
Other DBs
NCBI-ProteinID:
QDH20710
UniProt:
A0A4Y6UVP1
LinkDB
All DBs
Position
complement(1798001..1798945)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEINDGGTYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTIPGVTEDVTEIILNLKALSLKIHSDEEKVLEIDAEGEGLITAGDIRADSDVEI
LNPDLHIATLAPGSRLHVRIFAGRGRGYVQSVKNKRDDQPIGVIPIDSIYTPISRVNYAV
ENTRVGQVTNYDKLTLEVWTDGSIRPEEAVSLGAKILTEHVLLFVGLTDEARDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTTKSEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRQED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgatagaaatcgaaaagccgaaaatcgagaccgtcgagatcaacgacggaggcacgtac
ggtaagtttgtcgttgagcctctggaacgtggatacggtacgacgcttggaaactcgctt
cgtcgcatcctgctgtcgtcgcttcccggcgcagcggtcacttcggtccagattgacggc
gttctgcacgagttttcgacgatccccggcgttacggaagacgtaacggaaatcatcctg
aatctcaaagccttgtcgctgaagattcattccgatgaagaaaaggtactggaaatcgac
gcggaaggcgaaggcctgataacggctggagacatccgcgcagatagcgacgtggagatc
cttaacccggatctgcacatcgccactctggcaccgggatctagactgcatgtacgcatc
ttcgcaggccgcggccgcggttacgtacagtccgtcaaaaacaaacgtgacgatcagccg
atcggcgtcattccgatcgattcgatctacaccccgatttcccgcgtaaactacgcggtc
gaaaacacgcgggtcggacaagtcacgaactacgacaagctcactcttgaagtctggacc
gatggcagcattcgtccagaagaagcagtaagtcttggcgccaaaattttgaccgagcac
gtgctgctcttcgtgggtctgaccgacgaagcccgcgacgcggagatcatggtcgaaaaa
gaagaagacaagaaagagaaagtgctggaaatgacgatcgaagaactcgatctttccgta
cgttcttataactgtctgaaacgtgccggcatcaatacggtacaagagctgactacgaaa
tcggaagaagacatgatgaaagtccgcaacctgggccgcaagtctttggaagaagttcaa
gagaagctcgaagagctgggcctcggtcttcgtcaagaagactaa
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