Saccharibacillus brassicae: FFV09_07735
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Entry
FFV09_07735 CDS
T06082
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
saca
Saccharibacillus brassicae
Pathway
saca03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
saca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FFV09_07735 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saca03021
]
FFV09_07735 (rpoC)
03400 DNA repair and recombination proteins [BR:
saca03400
]
FFV09_07735 (rpoC)
Enzymes [BR:
saca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FFV09_07735 (rpoC)
Transcription machinery [BR:
saca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FFV09_07735 (rpoC)
DNA repair and recombination proteins [BR:
saca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FFV09_07735 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QDH20743
UniProt:
A0A4Y6USS7
LinkDB
All DBs
Position
complement(1818038..1821652)
Genome browser
AA seq
1204 aa
AA seq
DB search
MLDVNNFEFIKIGLASPDKIRSWSRGEVKKPETINYRTLKPEKEGLFCEKIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLALDM
SPRSLEEVIYFASYVVTDPGETPLERKQLLSEKEYRSYREKYGYGFHAGMGAEAVKKLLQ
DMDVDKELEFLKEELRTTQGQRRSRAIKRLEVIEAFKSSGNNPDWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVNKGLAHNIKSAKRKVERVSAEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPILVEGKAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLASGNIL
NPKDGKPVVTPSQDMVLGTYYLTMDNNQAMGAGMILRNINEAVSAYQRGTAELHARVAIP
VKALNKTSFTDKQQGAMLITTIGRIIFNEIFPASFPYINDATRANLFDGVAEDFFIYEKG
ENVTDRIMNAPQTKGIGKEYLGEIIGRCFEVYQTTQTSMILDEIKQLGFTYSTRSGVTVA
VSDVVVPPEKKALMEESDKKVAVITNQYRRGLITNEERYDRVIEIWSHAKDQISDILMKS
MDRYNSIMLMVDSKARGNKSQITQLGGMRGLMANPSGRIIELPIKSNFREGLTVLEYFLS
THGARKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTDKGFSVSRIQDGKEVIEDL
YDRIEGRYCFETVRHPQTNEIIATRNELITSDKAEEIIKAGVEKLQIRSVLSCRARHGVC
KKCYGRNLATGKHVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEL
FEARNPKGQATISEIDGVVKEIREAKDRREIEIQGEAESKTYLVTYGSRLRVREGMAVEA
GDELTDGSIDPKEMLRIKGIRGVQNYILQEVQRVYRNQGVEINDKHVEVMIRQMLRKIRI
VDAGETTLLPGSFVEIHEYEKANKEAMLNGKDPAVAKPILLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKVDQLLGLKENVLIGKLIPAGTGMSRYRNVRFEDPEGAASGEATLEP
VTTE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
ttgttggatgtaaacaacttcgagtttatcaagatcgggctcgcttcgccggacaagatt
cgttcttggtcccgcggcgaagtgaagaagccggaaacgatcaactatcgtacgctcaaa
ccggagaaagaaggtcttttctgcgaaaagatcttcggaccgaccaaagactgggagtgc
cattgcggcaagtacaaacgggtacgctataaaggcgtcgtctgcgatcgctgcggcgtt
gaagttacccgtgcgaaagtacgccgcgagcggatgggccatatcgagctcgccgctccg
gtttcccacatctggtacttcaaagggattccgagccgtatgggcctggcactggatatg
tcgccgcgctcgctcgaagaagtcatttacttcgcttcgtatgtcgtcaccgatccgggc
gaaacgccgcttgaaagaaagcagctcctgtccgaaaaggaataccgcagctaccgtgaa
aaatacggctacggattccatgccggcatgggcgccgaagcggtcaaaaagctgcttcag
gacatggatgtcgacaaagagctggagttcctcaaggaggagctccgtacgactcaggga
caacgcagaagccgtgcgatcaaacgtctggaagtcatcgaagcgttcaagagctcgggt
aacaacccggactggatgatcctcgacgtgcttccggtcattccgccggaacttcgcccg
atggtccaattggacggcggccgcttcgcgacctccgaccttaacgatctgtaccgccgc
gtcatcaaccggaacaaccgtctgaaaagactgcttgatctgggcgctccggacattatc
gtacagaacgaaaaacgcatgctgcaggaagcggtagacgccctgatcgacaacggccgt
cgcggccgtccggtcacaggcccgggtaaccgtccgctcaaatccctcagccatatgctc
aaaggtaaacaaggccgtttccgtcagaacttgctcggtaaacgggtcgactattccggc
cgttccgttatcgtcgtaggtcctaacctgaagatgtaccaatgcggtcttccgaaggaa
atggcactggagctgttcaagcctttcgttatgaaagagcttgtcaacaaaggtctggcc
cacaacatcaagagtgcgaagcgcaaagtcgaacgcgtaagcgccgaagtgtgggacgtg
cttgaagaagtcatcaaggagcatccggttctgttgaaccgtgcccctacgcttcaccgt
ctcggtatccaggcattcgaaccgattctggtcgaaggcaaagcgattcgccttcacccg
ctcgtatgtacggcttacaacgccgacttcgacggcgaccagatggccgtgcacgttccg
ctgtccgcggaagcgcaggccgaagcccgcattcttatgctggcgtccggtaacatcctg
aacccgaaagacggcaaacctgtcgttaccccttcgcaggatatggtcctcggaacgtat
tacctgacgatggacaacaaccaggccatgggcgcaggcatgattttgcgtaacatcaac
gaagcggtgtccgcttaccagcgcggcacggccgaactccacgcccgcgtggcgattccg
gtcaaagctctcaataaaacaagcttcaccgacaaacagcaaggcgcgatgctgattacg
acgatcggccggattattttcaacgagattttcccggcaagcttcccgtatatcaacgac
gctacccgcgcgaacctgttcgacggcgtggccgaagacttcttcatctatgaaaaaggg
gagaacgttaccgaccgcatcatgaacgctccgcaaacgaagggcatcggcaaagagtat
ctgggcgaaatcatcggacgctgcttcgaggtctaccagacgactcaaacttcgatgatc
ctcgacgaaatcaaacagctcggctttacgtactcgactcgttcgggcgtaaccgtagcc
gtttccgacgtcgttgtaccgccggagaaaaaagcgctgatggaagagtcggacaagaaa
gtcgcggtcattacgaaccagtaccgccgcggcctgattaccaatgaagaacggtacgac
cgggttatcgagatctggtcgcatgccaaagatcaaatcagtgacattctgatgaaatcg
atggaccgttacaattccatcatgctcatggtcgattccaaagcccggggcaacaaatcg
cagatcacccagctgggcggcatgcgcggcctgatggccaacccgtcgggtcggatcatc
gagctcccgatcaagtcgaacttccgcgaaggccttacggtcctcgaatacttcctgtct
acgcacggcgcgcgtaaaggtctggccgataccgcgcttcgtaccgccgactcgggttac
ctgacccgtcgtctggtcgacgtagcccaggacgttatcgtgcgcgaagacgactgcggc
acggataaaggcttcagcgtaagccgtatccaggacggcaaggaagtcatcgaagacctg
tacgaccggatcgaaggtcgttactgcttcgagacggtacgccatccgcaaacgaacgaa
atcatcgcgacccgcaacgaactgattacttccgacaaagcggaagaaatcatcaaagcg
ggcgtggagaaactgcaaatccgttccgtactgagctgccgcgcacgtcacggcgtctgc
aaaaagtgctacggacggaaccttgctacgggtaaacacgtcgaaatcggcgaagcggtc
ggcatcatcgccgctcaatcgatcggcgagccgggaacccagctcaccatgcgtacgttc
cacaccggcggcgttgccggcgacgacatcacgcagggtctgccgcgtatccaggagctg
ttcgaggcccgtaaccctaaaggtcaggccacgatcagtgagattgacggcgtcgtgaaa
gagatccgcgaagcgaaagaccgtcgcgagatcgaaattcagggcgaagccgaaagcaaa
acgtatttggttacctacggttcccgtctgcgcgtacgcgaaggcatggccgtggaagcc
ggagacgagctgacggacggttcgatcgacccgaaagaaatgctgcgcatcaaaggcatc
cgcggcgtgcagaactatatccttcaggaagttcagcgcgtataccggaaccagggcgta
gaaatcaacgacaagcacgtcgaagtcatgattcgtcagatgctgcgcaaaatccgcatc
gtcgacgcaggcgaaacgacgctgctgccgggatcgttcgtggaaatccacgagtacgaa
aaggcgaacaaagaagcgatgttgaacggcaaagatccggctgtagccaaaccgatcctg
ctcggtatcaccaaagcgtccctggagaccgattccttcctgtcggccgcatcgttccag
gaaacgacgagagtgcttaccgacgccgcgatcaaaggcaaagtcgatcagctgctcggc
ctcaaagaaaacgtgttgatcggtaagctgattcctgccggtaccggcatgagccgttac
cgcaatgtgcgtttcgaagatccggaaggcgcagcaagcggagaagcgacgctggagccc
gttacgaccgaataa
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integrated database retrieval system
