Saccharibacillus brassicae: FFV09_08750
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Entry
FFV09_08750 CDS
T06082
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
saca
Saccharibacillus brassicae
Pathway
saca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FFV09_08750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saca03019
]
FFV09_08750
03009 Ribosome biogenesis [BR:
saca03009
]
FFV09_08750
Enzymes [BR:
saca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FFV09_08750
Messenger RNA biogenesis [BR:
saca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FFV09_08750
Ribosome biogenesis [BR:
saca03009
]
Prokaryotic type
rRNA helicases
FFV09_08750
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
QDH20930
UniProt:
A0A4Y6UWD6
LinkDB
All DBs
Position
complement(2079854..2081578)
Genome browser
AA seq
574 aa
AA seq
DB search
MKTFKDLGIAPEVLDRLQAQGITVPTPVQQASLPLALAGRDLMVQAQTGTGKTLAFILPI
LDKIAAGREWNDGGRSEGMGLPPALVVAPTRELALQITVEARKMAGPEMRILSVYGGQDV
EAQLHKLKSGCDLVIGTPGRLLDHIRRETLKLGKVKTLVLDEADQMLHMGFLKEVQAIIE
ATPPSRQTMLFSATLPDTVRHLAGAYTKDAEQISITPTEKIPARNIRQIALECTDRNKYD
ALKFLINRDNPYLAVVFCRTKRRASKLNEDLQLEGFNSAELHGDLSQNKREQVMRAFREA
RLQILVATDVAARGLDVEGVSHVFNFDIPQDTDSYIHRIGRTGRAGDKGLAYTFVAQRDH
GILDLIEQATRQRPERVAFQNGGVIRVADASRRTGGEGREEREGREGSVKGGARRGSGGG
RSNQEGGRGRRGSESAGGRGEASRGAARRVAGGEDRAGRDGAGANRRGGSARGESAGRGG
ARSEGSGSAGAGRAGRTGGEPGRGSGGYSRGADTERSAGPSRGGSPDRGGQSRGGKGGSG
RSGGGRPEGGGSGNGGRSSGGGRGSDSGSRGRRR
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatttaaagatttggggatcgctcccgaggtgctggaccgtttgcaggcacag
ggcattaccgtaccgactccggtacagcaggcttcgcttccgctcgctttggccggacgc
gacctgatggttcaggcgcagacaggcaccggcaagacgctggccttcatcctgccgatt
ctggacaagatcgcagccggacgcgaatggaacgacggcggccgctcggaaggcatgggc
cttccgcccgcgctcgtcgtggcaccgacgcgcgaactggcgctgcagatcacggtcgaa
gcccgcaagatggccggaccggaaatgcgcatcctgtccgtatacggcggccaggacgtc
gaagcgcagctgcataagctcaaaagcggctgcgacctcgtcatcggcacgccgggacgc
ctgctggaccatattcgccgcgagacgctgaagctcggcaaggtcaagacgctcgtcctc
gacgaagcggaccaaatgctgcatatgggcttcctcaaagaagttcaggcgatcatcgaa
gcgacgccgccgtcccgccagacgatgctgttctcggcaacgctgccggacacggtgcgc
catctggccggcgcgtacaccaaagacgccgagcagatcagcattacgccgaccgagaag
attccggcgcgcaatattcgccagatcgcgctcgaatgcacggatcgcaacaaatacgat
gcgctcaagttcctgatcaaccgcgacaatccttatctggcagtcgtcttctgccggacg
aagcgccgcgcttccaagctgaacgaagacctgcagctcgaaggcttcaactccgccgag
ctgcacggtgacttgtcgcagaacaagcgcgagcaggttatgcgcgcgttccgcgaagca
cgtctgcaaatcctcgtcgcgacggacgttgcggcgcgcggcctcgacgtcgaaggcgtc
tcgcacgtcttcaacttcgatattccgcaggatacggacagctatatccaccggatcggc
cggaccggccgcgccggcgataaaggtctggcgtacacgttcgtcgcgcagcgcgaccac
ggcatcctggatctgatcgaacaggcgacccggcagcggccggaacgcgtcgctttccag
aacggcggcgttattcgcgtcgccgacgcttcgcgccgcacgggcggcgaaggccgtgaa
gaacgcgaaggccgcgaaggctccgtcaagggcggcgcccggcgcggctcgggcggaggc
cgcagcaatcaggaaggcggccgggggcgccggggcagcgagagcgccggcggacgcggc
gaagcttcgcgcggcgccgcgcgccgcgtagccggcggcgaagaccgcgccggacgcgac
ggcgcgggagccaaccgccgcggcggcagtgcccgcggcgagagcgcgggccggggcgga
gcgcgcagcgaaggcagcggctccgcgggagccggccgcgcagggcgcaccggcggcgag
ccgggccgcggcagcggcgggtactcgcgcggcgccgatacggagcgcagcgcaggacct
tcgcgcggcggaagtcccgaccgcggcggtcaaagccgcggcggcaagggcggttccggc
cgcagcggcggaggccgtccggaaggcggcggcagcggtaacggcggacgcagcagcggc
ggcggtcgcgggtccgactcgggcagccgcggtcggcgccgctaa
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