Saccharibacillus brassicae: FFV09_12310
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Entry
FFV09_12310 CDS
T06082
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
saca
Saccharibacillus brassicae
Pathway
saca03420
Nucleotide excision repair
saca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
saca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FFV09_12310
03430 Mismatch repair
FFV09_12310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saca03400
]
FFV09_12310
Enzymes [BR:
saca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FFV09_12310
DNA repair and recombination proteins [BR:
saca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FFV09_12310
MMR (mismatch excision repair)
Other MMR factors
FFV09_12310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
YdjO
AAA_30
MsrA_helical
Glyco_hydro_46
Motif
Other DBs
NCBI-ProteinID:
QDH21553
UniProt:
A0A4Y6UV17
LinkDB
All DBs
Position
complement(2941456..2943810)
Genome browser
AA seq
784 aa
AA seq
DB search
MTSRFENKPFGVSSGKVPRAEIAAPGGREPNRPGGDRGERDAAYFRLLEQSGIRLNPAQA
AAVRCTDGPLLTLAGAGSGKTSTLVCRTGYLLDVCGVDPSGILLLTFSSKAAAEMRERIA
GLPGIDAYAAGRIQARTFHSFCLWLLFSQGMQKEIFGDTRRQHIQLQQLMRELSLQDAYP
PENLLALLSSYKVNLMTADDLPDKSDTDRQMKRILLRYEAWKEETGRIDFDDVLTGAHAL
LKQRPELLDRLRRRFTHLMIDEFQDTNLLQYEVVKMIAAPRNNLMVVGDDDQTIYSFNGA
RSEFILEFEKLYPRARIVTLDINYRSVPSIVGLGNEVIRHNKMRRSKTLRAANGGALLPA
YMRPESADDEATAIVDHINREVAAGRRNYGDFAVLYRSSSSNRAVLEQLVIRDIPHIDYG
DGRLLYEHWLVKPVLDHMRLSINRRDFDAMPSVLPTLYIARDKGMAHIRQTDEARPKKGP
LVHLLTLPGLKEFQLDKIRQRLEVIRSLKGLVPAAAVTQIRQSFYDAYIQAGEHSEQTSH
REMLKEMLDELETSAGRFDSIVSFLAFVDDMLLRNQQTAAVKSQAQGNRVALMTIHKSKG
LEFPAVFLIGASEGTLPHASALGADSLRDTRVGLEGEASYAEALEEERRLAYVAVTRAKE
QLFVSSPAVQRGKKAAVSRFLLSAFGQETAASDAAVRAEYGGRRGGAPDPGRFGKVRADR
FGRSGTSSAAEAPVRTQSVPAWLCTSGSCVAWTRIMHSKDMNAAHKPCPLCGSPMRKGRK
DVPV
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgagatttgagaacaagccgttcggcgtatcctcggggaaagtgccccgcgcc
gagatcgccgcgccgggcgggcgcgagccgaaccggccgggcggagaccgcggcgagcgg
gacgccgcctatttccggctgctggagcagtcgggtatccgcctcaacccggcgcaggcc
gcggcggtgcgctgcaccgacggaccgctgctgacgcttgcgggcgcagggtccggcaag
acgagcacgctcgtctgccggaccggctacctgctcgacgtctgcggcgtcgatccgtcc
ggcatcctgctgctgaccttctccagcaaggccgcggcggagatgcgcgagcggatcgcc
gggctgcccggcatcgacgcctatgcggccggacgcatccaggcccgcacgttccattcg
ttctgcctgtggctgctgttcagccagggcatgcaaaaagaaattttcggcgatacgcgc
cgccagcatatccaactgcagcagctcatgcgcgagctgagcctgcaggatgcctatccg
ccggaaaatctgctggcgctgctgtcttcctacaaagtcaacctgatgacggccgacgac
ctgccggacaaaagcgataccgaccgccagatgaaacgcatcctgctgcgctacgaagcg
tggaaagaagagacgggccggatcgacttcgacgacgtgctgaccggcgcccacgcgctg
ctcaagcagcgcccggaactgctcgaccggctgcgccgccgcttcacccacctgatgatc
gacgagttccaggacacgaacctgctccagtacgaagtggtcaagatgatcgccgcgccg
cgcaacaacctgatggtcgtcggcgacgacgaccagacgatctattcgttcaacggcgcc
cgcagcgaattcattctggaattcgagaagctgtatccacgggcgcgcatcgtgacgctc
gatatcaattaccgctccgtgccatcgatcgtcggcctcggcaacgaagtgatccggcac
aacaagatgcgccgcagcaagacgctgcgcgccgcgaacggcggcgccctgctgccggct
tatatgcggccggagtcggccgacgacgaagcgacggccatcgtcgaccatatcaaccgc
gaagtagcggcgggacgccggaactacggcgatttcgccgtgctgtaccgctcttcgagc
agcaaccgcgcggtgctggagcagctcgtcattcgcgatattccgcatatcgattacggc
gacgggcggctgctgtacgagcactggctcgtcaagcccgtgctcgaccatatgcggctg
tcgatcaaccgccgcgatttcgacgcgatgccgagcgtgctgcccacgctgtacatcgcc
cgcgacaaaggcatggcgcatattcgccagacggacgaggcgcggcccaaaaaagggccg
ctcgtccatctgctgacgctgcccgggctgaaagaattccagctcgacaagatccgccag
cggctcgaagtgatccgctcgctcaaagggctggtcccggccgccgcggtgacccagatc
cgccaaagcttctacgacgcctatatccaggcgggcgagcacagcgagcagacctcgcac
cgcgagatgctcaaggagatgctcgacgaactggagacgtcggccggacgcttcgattcc
atcgtctcgttcctcgccttcgtcgacgacatgctactgcgcaaccagcagaccgcggcc
gtcaaatcgcaggcgcagggcaaccgggtcgccctcatgaccattcacaagtccaaaggc
ctggaattcccggctgtcttcctgatcggcgcgtccgaaggcacgctgccgcatgcctcc
gcgctcggcgccgattcactgcgcgatacgcgcgtcggcctcgaaggcgaagccagctac
gccgaggcgctcgaagaggagcgccggctggcttatgtcgccgtgacccgggcgaaagag
cagctgttcgtcagttcgcccgccgtgcagcggggcaagaaagccgccgtgtcgcgcttt
ctcctgtccgctttcggacaggagaccgcggcttcggacgctgcggtccgcgccgaatac
ggcggccggcggggcggagcgcccgacccgggccggttcggcaaggtccgcgccgaccgc
ttcggccgcagcggcacctcgtccgcggccgaggcgccggtccggacgcagagcgtgccg
gcgtggctgtgcacgtccggctcctgcgtcgcctggacgcggatcatgcacagcaaagac
atgaacgcggcgcacaagccgtgcccgctgtgcggatcgccgatgagaaaaggacgcaaa
gacgtccccgtctga
DBGET
integrated database retrieval system
