Saccharibacillus brassicae: FFV09_17070
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Entry
FFV09_17070 CDS
T06082
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
saca
Saccharibacillus brassicae
Pathway
saca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
saca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FFV09_17070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saca03400
]
FFV09_17070
Enzymes [BR:
saca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
FFV09_17070
DNA repair and recombination proteins [BR:
saca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FFV09_17070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QDH22399
UniProt:
A0A4Y6UXD4
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All DBs
Position
4108423..4109550
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AA seq
375 aa
AA seq
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MLKIGSHVSFSDKGLVSAANEANGYGSTSFMIYTGAPQNTRRKPMDTMNIEEGLKLMEQN
GVPEIVVHAPYIVNLASYKDHTYELGVSFLQEEIRRTHAIGTKQIVLHPGAFTDKDLEYG
IERIAAGLTEVLSGVEETDVNIALETMAGKGTEVGRKFEEIARIIDKVPNNGRLSVCMDT
CHIHDAGYDVANDFDGVLKQFDDIVGLNRLGVMHINDSKNPVGAGKDRHTPIGAGWIGFE
ALNGVVNHPSLSHLPFILETPWIGKDVKTQRPMYEVEIALLRGTVSERFGTGFGEDVEKL
HAFFAAQGLDPRAFTLDTWSVLKNDAKAKKADPREPLERLYDLAVQESVLPNVSEEDLNK
RLIAVLAGREALARF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagatcggctcccacgtgtctttttcggacaagggactggtgagcgcggcgaac
gaagcgaacggctacggatcgacctcgttcatgatatatacgggtgctccgcagaacacg
cggcgcaaaccgatggacacgatgaacattgaagaaggactcaagctgatggagcaaaac
ggagtgccggagattgtcgtgcacgcgccgtacatcgtcaacctcgcttcgtacaaagac
catacgtacgagctgggcgtcagctttttgcaggaagaaatccgccggacccacgcgatc
ggcacgaagcagatcgtgctgcatccgggcgcgttcacggacaaggatctggaatacggc
atcgagcgtatcgcggcgggactgaccgaagtgctgagcggcgtggaagagaccgacgtg
aatattgcgctggagacgatggcgggcaaaggaacggaagtcggccgcaagttcgaagag
atcgcgcgcatcatcgacaaagtaccgaacaacggacgtctcagcgtctgcatggacacc
tgccatattcacgatgccgggtacgacgtcgcgaacgattttgacggggtgctgaagcag
ttcgacgacatcgtgggattgaatcgtctcggcgtcatgcatatcaacgacagcaaaaat
ccggtcggcgcgggcaaagaccgtcatacgccgatcggcgcgggctggatcggattcgaa
gcgctcaacggggtcgtcaaccatccgtcgctgagccatctgccgttcattttggagacg
ccgtggatcggcaaagacgtcaaaacgcagcgtccgatgtacgaagtcgaaatcgcgctt
ctgcgcggcaccgtgagcgagcgcttcggcacgggcttcggcgaagacgtcgagaagctg
catgcctttttcgcggcgcagggccttgatccgcgcgcgttcacgctcgatacgtggtcg
gtgctcaaaaacgacgccaaagccaaaaaggccgatccgcgcgaaccgcttgagcggctg
tacgatctcgcggtgcaggagtcggtgctgccgaacgtctccgaagaagacctcaacaaa
cgtctgatcgccgtgctggcaggcagggaagcgctggcgcggttctaa
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