Saccharibacillus brassicae: FFV09_17375
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Entry
FFV09_17375 CDS
T06082
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
saca
Saccharibacillus brassicae
Pathway
saca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FFV09_17375 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saca03019
]
FFV09_17375 (recQ)
03400 DNA repair and recombination proteins [BR:
saca03400
]
FFV09_17375 (recQ)
Enzymes [BR:
saca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FFV09_17375 (recQ)
Messenger RNA biogenesis [BR:
saca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FFV09_17375 (recQ)
DNA repair and recombination proteins [BR:
saca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FFV09_17375 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
Motif
Other DBs
NCBI-ProteinID:
QDH22453
UniProt:
A0A4Y6UXK1
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All DBs
Position
4187492..4189453
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AA seq
653 aa
AA seq
DB search
MAIEETKMMEQAGELLQKYYGYPDFREGQKKIVESLLTRSDTLGIMPTGGGKSICYQIPA
LMMEGLTLVVSPLISLMKDQVDALVTNGIAAAYINSTLSGREVNDRIRAAQRGELKLLYV
APERLELDWFREEMSNLRIDCVAVDEAHCVSQWGHDFRTSYLAVAPFVDSLPHRPTVAAF
TATATPQVMDDIVRLLELQGANTFVTGLGRDNLAFSVLRGESKKDYIFDFAKTHASEAGI
VYAATRKEVDELYSKLSMQGLSAGRYHAGMSDVERESAQEAFLYDDVRVMVATNAFGMGI
DKSNVRYVIHYNMPKNMEAYVQEAGRAGRDGEPSECILLFSAQDIVVQKFLIEQNGQEEE
RRRNEYRKLQQMVDYCYTTRCLRSAQLDYFGEEHADEPCGTCSSCRDDREVIDITVDAQK
IFSCIYRMRERFGASMVAGVLKGSRNKKVLQYKFDQLSTYGMMNGKTEKEIVDMINVLAS
EGYLELTEGQYPVVKLRQLATEVLKGGRQVFQREARKASFAASSGSRSSRPRADEKLSAV
EITIFEQLRLIRRELAEKEHVPSYIIFNDATLSEMSIHKPRTEFEMLRIKGVGEVKYRKY
GRPFLEFFQNREGDAGGGSSAADDGGYYDMEAPPEDDSNLFAYYEDPDPSNPS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgaagaaacgaagatgatggagcaggccggggaactgctgcagaaatattac
ggctaccccgattttcgcgaaggccagaagaagatcgtcgagagcctgctgacgcgcagc
gatacgctcggcatcatgccgaccggcggaggtaaatcgatctgctaccagattcccgcc
ctgatgatggaaggcttgacgctggtcgtctcgccgctgatctcgctcatgaaagaccag
gtggacgcgctcgtgaccaacggcatcgcggcggcctacatcaacagcacgcttagcggc
cgcgaagtgaacgaccggattcgcgcggcgcagcgcggcgagctgaagctgctgtacgtg
gcgccggagcgtcttgagctggactggttccgcgaagaaatgtccaatctgcgcatcgac
tgcgtcgccgtcgacgaagcgcactgcgtttcgcagtggggacacgatttccggacgagt
tacctcgccgtcgcgccgttcgtcgattcgctgccgcaccgcccgaccgtggccgctttt
accgcgacggcgacgccgcaggtcatggacgatatcgtgcggctgctggagcttcaggga
gccaatacgttcgtcaccgggctcgggcgcgacaatctggcgttctccgtactgcggggc
gagagcaagaaagactacattttcgattttgccaagacgcacgcgagcgaagcgggaatc
gtatacgccgcaacgcgcaaagaagtggacgagctgtattccaagctgtcgatgcaggga
ttgtctgcgggccgctaccatgcgggcatgagcgacgtggagcgcgaaagcgcgcaggaa
gcttttctgtacgacgacgtgcgcgtcatggtcgccaccaacgcgttcggcatggggatc
gacaagtcgaacgtccgctacgttatccactacaatatgcctaaaaatatggaagcgtac
gtgcaggaagcgggccgggcgggccgggacggcgagccgagcgaatgtatcctgctgttc
agcgcccaggatatcgtggtccagaaattcctgatcgagcagaacggacaggaagaagaa
cgccgccgcaacgaataccgcaagcttcagcagatggtcgattactgctatacgacaaga
tgcctgcgcagcgcccagctggactatttcggcgaagagcatgcggacgagccgtgcgga
acgtgcagctcgtgccgcgacgaccgcgaagtgatcgacattacggtggacgcgcaaaaa
atcttctcctgcatctaccggatgagagagcgtttcggcgcttcgatggtagccggcgtg
ctcaaaggctcgcgcaacaaaaaagtgcttcagtacaagttcgaccagctgtccacgtac
gggatgatgaacggcaagacggaaaaagaaatcgtcgacatgatcaacgtgctcgcttcc
gaaggctatctggagctgaccgaagggcagtatcccgtcgtcaagctgcggcagctcgcc
accgaagtgctcaaaggcggccgccaggtgttccagcgcgaagcgcgcaaagcgtcgttt
gcggcgtcttccggttcgcggagcagccgcccgcgcgcggacgagaagttgtcggcggtc
gagatcacgatcttcgagcagctgcgcctgatccggcgcgagctggcggagaaagaacat
gtgccgtcctatatcatcttcaacgatgcgacgctgagcgagatgagtatccacaagccg
agaaccgagttcgagatgctgcggatcaaaggcgtcggcgaagtcaaataccgcaaatac
ggccgtccgttcctggagtttttccagaaccgggaaggcgacgccggaggcggcagttcc
gcagcggacgacggcggctattacgacatggaagctccgccggaagacgattccaacctg
ttcgcctactacgaagaccccgatccgtcgaacccttcgtaa
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