Saccharibacillus brassicae: FFV09_17965
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Entry
FFV09_17965 CDS
T06082
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
saca
Saccharibacillus brassicae
Pathway
saca03030
DNA replication
saca03430
Mismatch repair
saca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FFV09_17965
03430 Mismatch repair
FFV09_17965
03440 Homologous recombination
FFV09_17965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saca03032
]
FFV09_17965
03400 DNA repair and recombination proteins [BR:
saca03400
]
FFV09_17965
Enzymes [BR:
saca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FFV09_17965
DNA replication proteins [BR:
saca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FFV09_17965
DNA repair and recombination proteins [BR:
saca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FFV09_17965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
QDH22562
UniProt:
A0A4Y6UXT5
LinkDB
All DBs
Position
4328673..4332314
Genome browser
AA seq
1213 aa
AA seq
DB search
MNDFVHLHVHSEYSLLDGAARIKELVGRAAELGMKSLALTDHGVMYGAIPFYKACRAAGI
KPILGFEAYYTSASRTERASRKEQPIYHLLLLAKNETGYRNLMKICTAGHLEGFHYKPRI
DREVLERYSEGIVCTSACIGGEIPQHFLNGRPEEAKAAALRYKEIFGENFYIELQDHGLA
EQKKVNPMLIALAEEIQVELIVTNDSHYLAEPDAEIQDVLICIGTGKTMEDEERFRIPTR
QLYLKTGEEMARLFPHLPKALANTAKIAQQCELELELGRSILPEYRPLPEGRSPQQYLID
LCREGLERRYAHLPGWEDPAHRSKLDERLEYELGVIGTMGFSDYFLIVWDFIRYAHEQGI
VTGPGRGSSAGSLVAYTLNITDVDPIKYNLLFERFLNPARITMPDIDIDFSDERRDEVIA
YVTDKYGADRVAQIITFGTLAARAAVRDVGRVLALPYGEVDKTAKLIPVQVGMTIDRALA
QNAALRDRLEASPDASRLIETARRVEGMPRHASTHAAGVVIARGPLTDYVPLQEGGEKTA
LTQYPMESLEAVGLLKMDFLGLRTLSIIERCQKWIAERTGAAVDFKAVSENDPGTYELLG
RGDTTGVFQLESPGIRRVMKEMKPSVIEDIISVVALYRPGPMEFISNYIQVKHGLVRADY
PHEDLKPILEDTHGIIVYQEQIMQIASTMAGFSLGEADLLRRAVSKKKRETLDEERGHFV
RGSLGQAYSEEDANKVYDMIVRFADYGFPRAHAAAYGVLAFQTAYLKAHYPVEFMASMLA
AVTGNHRKVAEYVVETRRMNIPVLPPDVNKSGMLFTPSEEDGKASLRFGLAAIKNVGTNA
IRSIMDERAERPFDSLLDFCRRVDPKTCNRRVVEALIQAGAFDSLPGHRAQLLAMLDEAL
DAAAKWRKEREDFQIQMFDFVETPNWEIEYPDVRDYTSSEQLDLERDLLGLYLSGHPLDD
YEPLLGEAGVQKLMELGDAPDESHAVTVGMVVSLKTITTKQGKAMAFAEIEDQIERCELV
MFPEVWKRSQDVMQPGALLALRAKVQQQDEGFKLLADTVLPLGEDAVRSLLARGESRGGS
SSPSRKGQARPARPSVGSGDSSPRRPSGGAGSPPARPGTRPAAAAPSAPPASASADAKTP
RVFVKIAADRRNPEMLETLKQMLQSHPGSMPTLLFYEDTQKLIALSDAYRIEPTDELVTQ
MENLLGGGTVRVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattttgtccatctgcatgtgcacagcgaatacagcctgctcgacggagcggcg
aggatcaaggaactggtgggccgcgcggccgaactcggcatgaaatcgctcgcgctgacc
gaccacggcgtcatgtacggcgccattccgttttataaagcgtgccgggccgccggcatc
aagccgattctcggcttcgaagcctattatacgtcggcctcccggaccgaacgggccagc
cgcaaagagcagccgatctaccatctgctgctgctggccaagaacgagaccggctaccgc
aatctgatgaagatctgcacggccggccatctcgaagggttccattacaagccgcgtatc
gaccgcgaagtgctggagcgttacagcgaaggcatcgtctgcacgagcgcgtgcatcggc
ggagagattccgcagcatttcctgaacggacgtcccgaagaagccaaagcggcggcgctg
cggtacaaagagattttcggggaaaacttctatatcgaactgcaggatcacggcctggcc
gaacagaaaaaagtaaatccgatgctgatcgcgctggccgaagagattcaggtcgagctt
atagtgacgaacgattcgcattacctggccgaaccggacgccgaaattcaggacgtgttg
atctgtatcggtaccggcaaaacgatggaagacgaagaacggttccgtattccgacgcgg
cagctgtatctcaaaacgggcgaagagatggcccggctgttcccgcatctgcccaaggcg
ctggccaatacggcgaagatcgcgcagcagtgcgagctggaacttgaactgggccgctcg
atcctgccggaataccggccgctgccggaaggccgatcgccgcagcagtatttgatcgac
ctgtgccgcgaagggctggagcgccgctacgcccatctgccgggctgggaagatcccgct
catcggagcaagctggacgaacggctggagtatgaactcggcgtgatcgggacgatgggc
ttctccgattatttcctgatcgtctgggactttatccgctatgcgcacgagcagggcatc
gttacgggaccgggccggggttcgtccgcgggcagtctcgtcgcctatacgctgaacatt
acggacgtcgatccgatcaaatacaatctgctgttcgaacggttcctgaatccggcgcgg
atcacgatgcccgatatcgatatcgatttcagcgacgaacgccgcgacgaagtcatcgcc
tacgtgacggacaaatacggcgcggaccgcgtcgcgcagatcatcacgttcggcacgttg
gcggcccgcgccgcggtgcgcgacgtcggccgcgtgctggcgctgccgtacggcgaagtc
gacaagacggcgaagctgatcccggtgcaggtcggcatgacgatcgaccgcgcgctggcg
cagaacgcggcgctgcgcgaccgcctcgaagcgtcgcccgacgcttcgaggctgatcgaa
acggcccgccgggtcgaagggatgccgcggcacgcttcgacgcacgccgccggcgtcgtt
atcgcgcgcggtccgctgaccgattacgtcccgctgcaggaaggcggcgagaagacggcg
ctgacccagtatccgatggaaagtctggaagcggtcggcctgctgaagatggactttctg
gggctgcgcacgctgtcgatcatcgaacgctgccagaaatggatcgcggagcgaaccggg
gcggccgtcgatttcaaagccgtgtccgagaacgatcccggcacgtacgaactgctcggc
cgcggcgatacgaccggcgtgttccagctggagtcgccgggcatccgccgcgtcatgaaa
gagatgaagccgtcggtcatcgaagacatcatctcggtcgtggcgctgtaccgtccgggc
ccgatggaatttatctcgaattatatccaggtcaagcacgggctggtccgcgcggattat
ccgcacgaagacctcaagccgattctggaagacacgcacggtatcatcgtgtaccaggag
cagatcatgcagatcgcctcgacgatggcgggcttctcgctcggcgaagcggatctgctg
cgccgggccgtctcgaagaaaaagcgcgagacgctggacgaggaacgcggccacttcgtg
cgcggcagccttggccaggcctacagcgaagaagacgccaacaaagtgtacgacatgatc
gtgcgcttcgccgattacggcttcccgcgcgcccacgccgccgcctacggcgtgctggcg
ttccagaccgcttacctcaaagcgcattatccggtcgagttcatggcgtcgatgctcgcc
gccgtgaccggcaaccaccgcaaggtggccgaatacgtcgtcgagacgcgccggatgaat
atcccggtgctgccgccggacgtgaacaagagcggcatgctgttcacgccgtccgaagaa
gacggcaaagcgagcctgcgcttcgggcttgcggcgatcaagaacgtcggcacgaacgcg
atccgcagcattatggacgaacgcgcggagcggccgttcgacagcctgctcgacttctgc
cgccgcgtcgatccgaagacgtgcaaccggcgcgtggtcgaagcgctgatccaggccggg
gcgttcgattcgctgcccggccaccgcgcccagctcctcgccatgctggacgaagcgctg
gacgccgccgccaaatggcgcaaagaacgcgaagatttccagatccagatgttcgatttc
gtcgagacgccgaattgggagatcgaatatcccgacgtgcgcgattacacgtcgtcggaa
cagcttgatctggagcgcgatctgctcggtttgtatttgtccggccatccgctggacgat
tacgaaccgctgctcggcgaggccggcgtgcagaagctgatggaactcggcgacgcgccg
gacgagagccacgccgtcacggtcggcatggtcgtcagtctcaagacgatcacgaccaag
cagggcaaagcgatggctttcgccgagatcgaagaccagatcgagcgctgcgagctggtc
atgttccccgaagtgtggaagcgaagccaggacgtcatgcagcccggcgcgctgctggcg
ctgcgcgccaaagtccagcagcaggacgaaggcttcaagctgctcgccgacacggtgctg
ccgcttggcgaagacgccgttcgcagcctgctggcccgcggcgaatcgcgcggcggctct
tcgagcccgagccggaagggccaggcccgcccggcccgcccaagcgtgggcagcggcgac
agttcgccgcgcaggccttccggcggcgccggctcgccgcccgcccggccgggcacccgc
cccgccgcggccgcgccttctgcgccgcccgcgtcggcgtctgcggacgcgaagacgccg
cgcgtcttcgtcaagatcgcggccgaccgccgcaatccggagatgctggagacgctcaag
cagatgctgcaaagccatccgggctcgatgccgacgctgctcttctatgaagatacgcag
aagctgatcgcgctgagcgacgcctaccggatcgagccgacggacgagctggtgacgcag
atggagaacctgctcggcgggggaaccgtgcgcgtcaaataa
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