Saccharibacillus brassicae: FFV09_18605
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Entry
FFV09_18605 CDS
T06082
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
saca
Saccharibacillus brassicae
Pathway
saca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FFV09_18605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saca03019
]
FFV09_18605
03009 Ribosome biogenesis [BR:
saca03009
]
FFV09_18605
Enzymes [BR:
saca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FFV09_18605
Messenger RNA biogenesis [BR:
saca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FFV09_18605
Ribosome biogenesis [BR:
saca03009
]
Prokaryotic type
rRNA helicases
FFV09_18605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_RecD
CMS1
GRP
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDH22676
UniProt:
A0A4Y6V1Y7
LinkDB
All DBs
Position
4470991..4472571
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AA seq
526 aa
AA seq
DB search
MANFADFDLEPKVLQAITEMGFEEATPIQSQAIPIALSGSDMIGQAQTGTGKTAAFGIPM
ISKIAREEEKISALIMAPTRELAIQVADEIEKLARFKGLRSLAIYGGQDIVRQIRALKRK
PQIIIGTPGRLLDHINRKTIKLDDVHTVILDEADEMLDMGFMEDIQSILKLVPEERQTLL
FSATMPANIKRLAEQFLRNPQHVSVIPKQLSIPLIEQAYIEVPERQKFEALTRLIDMESP
ELAILFGRTKRRVDELAEALQKRGYSADGLHGDLSQNQRDAVMRKFRDGSIEVLVATDVA
ARGLDVSGVTHVINFDLPQDPESYVHRIGRTGRAGKEGKAWSFVTPRELDHLNFIERVTR
HKIARKPLPTMSEAIEGKQRILAERLLEVVQDGELNEYKAIAIQMLEQYDSVNLLSAAMK
LMTGEKKDSKIELTPEDPVRAKRRKPSGSYGGARSGGGYKGSGGGGYKGGSSSGGRTGGY
QGRSSSGGGGYKGSKEGGYQGRNSSSSKPSYQGQSDRPSPKRDFDN
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaattttgcagacttcgatttggaaccaaaggtattacaggcaattacggaaatg
ggctttgaagaagcgacaccgatccagtcgcaggcgattccaatcgccctgagcggaagc
gacatgatcggacaggcgcagaccggtacaggcaagacggcggcattcggcattccgatg
atcagcaagatcgctcgcgaagaagagaagatctcggctctgatcatggcacctacccgc
gaactcgcgattcaggttgccgacgaaatcgagaagctcgcacgcttcaagggacttcgt
tccctcgccatctacggcggacaagacatcgtgcgccagatccgcgctctcaaaagaaag
ccgcagatcatcatcggtacgccgggacgtctgcttgaccatatcaaccgcaaaacgatc
aagctcgacgacgttcacacggttatattggacgaagcggacgaaatgctggacatgggc
ttcatggaagacattcagtccatcctgaagctcgttccggaagagcgtcaaacgctgctg
ttctcggcaacgatgccggccaacatcaagcgcctggccgagcagttcctgagaaacccg
cagcacgtatcggtcattccgaagcagcttagtatcccgctgatcgagcaggcttacatc
gaagtgccggaacgtcaaaagttcgaagcactgactcgcctgatcgacatggaatcgccg
gaacttgcgatcctgttcggacgcacgaagcgccgggtcgacgagctggcagaagcgctg
caaaagcgcggctattcggctgacggtctccacggcgacttgtcgcagaaccagcgcgac
gcggttatgcgcaaattccgcgacggcagcatcgaagtgctcgtagcgaccgacgttgcg
gcacgcggcctcgacgtatcgggcgtcacgcacgtcatcaacttcgaccttccgcaggat
ccggaaagctacgttcaccggatcggccgtacgggccgtgcaggcaaagaaggcaaagcg
tggtcgttcgtaacgcctcgcgagctggatcacctgaacttcatcgagcgcgttacgcgc
cacaaaatcgctcgcaaaccgctcccgaccatgagcgaagcgatcgaaggcaaacaacgc
atcctggccgagcgcctgctcgaagtggtacaggacggcgaactgaacgaatacaaagcg
atcgcgatccaaatgctggagcagtacgactccgttaacctgctgtcggcagcaatgaag
ctgatgaccggggagaaaaaagattcgaagatcgaattgactccggaagatccggttcgc
gcaaaacgtcgcaagccttcgggcagctacggcggcgcgcgcagcggcggcggttacaaa
ggcagcggcggcggtggctataaaggcggcagcagcagcggcggccgtacaggcggttac
caaggacgcagcagcagcggcggcggcggttacaaaggttcgaaagaaggcggctaccag
ggacgcaacagcagcagcagcaaaccttcgtaccagggccaaagcgaccgtccaagccca
aaacgagatttcgataactaa
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