Saccharibacillus brassicae: FFV09_19510
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Entry
FFV09_19510 CDS
T06082
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
saca
Saccharibacillus brassicae
Brite
KEGG Orthology (KO) [BR:
saca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saca03032
]
FFV09_19510 (topA)
03400 DNA repair and recombination proteins [BR:
saca03400
]
FFV09_19510 (topA)
Enzymes [BR:
saca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FFV09_19510 (topA)
DNA replication proteins [BR:
saca03032
]
Prokaryotic type
DNA Topoisomerases
FFV09_19510 (topA)
DNA repair and recombination proteins [BR:
saca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FFV09_19510 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_3
DinB
Toprim_2
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
QDH22843
UniProt:
A0A4Y6UYL9
LinkDB
All DBs
Position
4669913..4672012
Genome browser
AA seq
699 aa
AA seq
DB search
MADALVIVESPAKAKTIGKYLGSKFIVKASMGHIRDLPKSQIGVEVDNEFNPKYITIRGK
GSILKELKDASKKVKKVYLAADPDREGEAIAWHLAHALNIDNVQDCRVVFNEITKQAVKD
AFKTPRPINMDLVNAQQARRILDRLVGYKISPLLWKKVKKGLSAGRVQSVAVKLIIDREN
EISEFLPEEYWSITARLAVKGNEFEAKFHQLNGSKKELGSEQDVQEVLAAFEGKDFVVSE
VKERERQRHPSPPFTTSSLQQEAARKLNFRAAKTMSVAQQLYEGIDLGKEGTVGLITYMR
TDSTRVAASAQEEAKAFIGERYGTEFSPETPRQYSKKSAGSQDAHEAVRPTSMERDPESV
KAVMSRDQFRLYKLIWERFVASQMSSAVLDTLSVDIAAGDTTFRAVGSKVRFQGFMKVYV
EGNDDGSVEEDKFLPALVKGDKLEHKNTEPKQHFTQPPPRYTEARLVKTLEELGIGRPST
YAPTLETIQKRGYVAIEEKKFMPTELGELINEQMEQFFPEILDAEFTAHMEESLDHVEEG
EEQWVRVLREFYDTFEKRLEFAEEEMKEIEIQDEVSDEVCDKCGKPMVYKMGRFGKFLAC
SGFPDCRNTRPIVKNIGVTCPKCKEGHVVERRSKKGRIFYGCDQYPECDFVSWDRPSPKP
CPVCSSLMVEKRSKQGTKLQCTSCDHTELLEDSEDAAEV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgcgctagtcatcgtggaatcgcccgcaaaggcgaaaacgataggcaaatac
ctaggcagcaaatttatcgtcaaagcgtccatgggccatattcgggatcttccgaaaagc
cagatcggcgtcgaagtcgacaacgaattcaatccgaaatatattacgattcgcggtaaa
ggctcgatcctgaaagaattgaaagacgccagcaaaaaagtaaaaaaagtgtatctcgcg
gccgaccccgatcgcgaaggggaagcgattgcttggcacttggcgcatgcgctcaatatc
gacaacgtgcaggactgccgcgtcgtgttcaacgaaattacgaagcaggcggtcaaggat
gcgttcaagacgccgcgtccgatcaacatggatctggtcaatgcccagcaggcgcgccgc
attctcgatcggctggtcggctacaagatcagtccgctgctgtggaaaaaagtcaaaaaa
ggactgtccgcgggacgcgtacaatcggttgccgtcaaactgatcatcgaccgcgagaac
gaaatttccgagttcctgcccgaagaatactggagcattacggctcgccttgctgtcaaa
ggcaacgaattcgaagccaagttccaccaactgaacggcagcaaaaaagagctcggcagc
gaacaggacgtccaggaagtgctggccgcttttgaaggaaaagattttgtcgtaagcgaa
gtcaaagaaagagaacgccagcgtcatccgtctcctccattcacgacaagctcgctgcag
caggaagccgcgcgcaagctcaatttccgcgcagcgaagacgatgtcggtcgctcagcag
ctgtatgaaggtatcgatctcggcaaagaaggcacggtcggcttgattacgtacatgcgt
accgactcgactcgggtcgccgccagcgcccaggaagaagccaaagcttttatcggcgaa
cgttacggcaccgaattctcgccggagacgccgcgccaatattccaaaaaatccgcgggt
tcgcaggatgcccacgaagcggttcgtccgacttcgatggaacgcgatccggaatcggtc
aaagcggtcatgagccgcgaccagttccgtctgtacaagctgatctgggaacgtttcgtt
gccagccagatgtcttcggccgtgctcgatacgctgtccgtggacatcgcagccggcgac
accactttccgggcggtcggatcgaaagtccggttccagggtttcatgaaagtgtatgtg
gaaggcaacgacgacggaagcgtggaagaagacaagttcctgccggcgctcgtcaagggc
gacaagcttgaacacaaaaacaccgaaccgaagcagcatttcacgcagccgcctccgcgt
tatacggaagcccgtctcgtgaagacgctcgaagaactcggaatcggacgcccgagtacg
tatgcgccgacattggagacgatccaaaagcgcggatacgtggcgatcgaagaaaagaag
ttcatgccgaccgagctcggggaattgatcaacgaacagatggaacagtttttcccggag
attctcgatgccgagttcacggcgcatatggaagaaagcctcgaccatgtggaagaaggc
gaagaacagtgggtccgcgtgttgagagagttttacgacacgttcgagaaacgtctcgaa
ttcgcggaagaagaaatgaaagaaatcgaaatccaggacgaagtttcggacgaagtatgc
gacaaatgcggcaagccgatggtgtacaaaatgggccggttcggcaaattcctggcttgt
tccgggttcccggactgccgcaatacccgtccgatcgtcaaaaatatcggcgtgacctgt
ccgaaatgcaaagaagggcatgtcgtcgagcgccgcagcaaaaaagggcgtatcttctac
ggatgcgaccagtatccggaatgcgacttcgtttcgtgggaccgtccgtcgccgaagcct
tgtccggtatgcagctcgctgatggtcgaaaaacgcagcaaacagggaacgaagcttcaa
tgcacgtcgtgcgatcatacggaactgctggaagacagcgaagacgcagcggaagtttaa
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