Saccharibacillus brassicae: FFV09_19690
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Entry
FFV09_19690 CDS
T06082
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
saca
Saccharibacillus brassicae
Pathway
saca02020
Two-component system
saca02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
saca00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FFV09_19690
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FFV09_19690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saca03021
]
FFV09_19690
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
saca02035
]
FFV09_19690
Transcription machinery [BR:
saca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FFV09_19690
Bacterial motility proteins [BR:
saca02035
]
Flagellar system
Flagellar assembly proteins
Stator
FFV09_19690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
Sigma70_ECF
HTH_38
PhyR_sigma-like
HTH_23
Med15_N
Cmr1_C
Motif
Other DBs
NCBI-ProteinID:
QDH22877
UniProt:
A0A4Y6V317
LinkDB
All DBs
Position
4704270..4705058
Genome browser
AA seq
262 aa
AA seq
DB search
MDERKSGQLNHLDLWIRWKEHNDIEAKKKLIENHLSIVDYVSSRLAVGLPKNVSKDDLAS
NGVMGLIDAIEKFDYKRGLQFETYASWRVRGAILDGLRQGDWVPRSVREKAKKIEEAYQR
LEQENMRGASDLEMSEFLGISEKEFQQMLQDVSVMSLVSLEDPIRDEESETRISVLVDEK
AKNPDHKVNEFYLKEALAKGIDKLTEKERIVISLLYFEDLSLSEIAEVMSLSPSRISQLH
SKAILRLRGTLDKQKSLLMQDR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacgcaaatccggtcagttgaaccacctggatttatggattcgctggaaagag
cataacgatatcgaagccaagaagaaactgatcgagaatcacttatccattgtcgattac
gtctcttcgcgactggcggtgggactcccgaaaaacgtgtccaaagacgatctggcaagc
aacggggtcatggggctaatcgacgcaatcgaaaaattcgattataaacggggtcttcaa
ttcgagacttacgcttcctggcgggtacggggtgcgattctcgacggactgcgccaaggc
gattgggtgcctcggtcggtgcgggaaaaagcgaaaaagatcgaggaagcttaccaaagg
ctggaacaggaaaacatgcggggcgcttcggacctggagatgagcgagtttttgggcatt
tccgaaaaagaattccagcagatgcttcaggacgtatcggtcatgtcgcttgtgtcgctg
gaagatccgatccgcgacgaagaatcggagacccggatttcggtgctggtcgacgaaaaa
gccaaaaatcccgatcacaaagtgaacgagttttatttgaaggaagctttggcgaaaggg
atcgacaagctgaccgaaaaagagcggatcgtcatctcgctgctgtatttcgaagacttg
tcgctgagcgagatcgcggaagtcatgtcgctgtctccttcgcgcatatcgcagctgcac
tccaaagcgattttgcgtctgcgcggaacgctggacaagcaaaaaagcctgcttatgcag
gatcggtaa
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