Saccharibacillus brassicae: FFV09_20680
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Entry
FFV09_20680 CDS
T06082
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
saca
Saccharibacillus brassicae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4901
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
TetR_C_20
Motif
Other DBs
NCBI-ProteinID:
QDH23055
UniProt:
A0A4Y6V447
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Position
complement(4948734..4950965)
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AA seq
743 aa
AA seq
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MPLNSPATRAAFDERVRRAARGDASAFAELIVAERAQMLRVAGYYVRSAADAEDAVQEAI
CRAFTALPALEHPNYFRTWLIRIVINVSLSLLKSSRRTVATGGAEANTLAAPREETDRRL
DLMQALSILPPKYRTVIRLKYMHDLKLTDIAELLELPLGTVKTYQHKGLTLLRKQYRSEI
EDRRRVRARLEDDRAAREETEMELESELESELHSLLHQWRERAQALTRRHFAAAESELVP
FIEDAFPRDGAASELLFIRTKPGTDTGISVTLTPDGDLIDYAADPGLYHEADRQIRLEPD
ELLEIGERFVRDHYPDAFEQFNGPETEDRGDRLFFTFSQHAAGMPLPRSGFWIDLHRAGF
VTGFKYFGARAEPALPDGLLTPEQVLEQIDRELELNLHFMTLHEEVHVPGDNRLHLVYMP
NPYLTHRSALLPSSQPARPGAGDLPAADIPDPCAGSREPIADFMRRGVRTALPDPADLPE
TLGIREADYELLREQTTGREKTVVYRRRDEGKPVGEHGGTAESVKPYTLDDYMRERLEGT
VKLRFDTVSGRLRGLMNLHEEVGELDLSDDACLELALTLLHAADPLLFPYLRLNASDEPD
GPDTSDGPDKSEAEPPARRRTAAFIFSVCKNGVPGFFHQVSINVNRTTGRVTLYMDADLD
MAELESLPLVPSLSADEAKRRLLAALEPRLTWATVYPDDDSGEKRDELRYALVDRKSGRG
IRLIDAHTGQIVTDKNQPPLLDR
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgaattcccctgccacacgggccgctttcgacgaacgcgttcggcgggcggcc
cggggcgacgcctcggcgttcgccgagctgatcgtcgccgaacgtgcccaaatgctgcgg
gtcgccggctattacgtgcgcagcgccgccgacgccgaagacgcggtgcaggaagcgatc
tgccgcgcttttaccgcgctgcccgcgctggagcacccgaactattttcgcacatggctg
attcgtatcgttattaacgtctcgctgagcctgctcaaaagcagccgccgaacggtagcg
acgggcggagcggaagcgaatacgctggccgctccgcgcgaagagaccgaccggcggctc
gacctgatgcaggcgctgtcgattctgccgcccaaataccgcaccgtcatccggttgaaa
tacatgcacgatctcaaattgacggatatcgccgaactgctggaactgccgctcggcacc
gtgaagacatatcaacacaaaggcttgacgctgctgcgcaaacaataccgaagcgagatc
gaagatcgccggcgtgtccgggcccggctggaagacgatcgcgccgcacgggaggagacg
gaaatggaactggaatcggaattggaatcggaattgcatagtctgctgcatcaatggaga
gaacgcgcccaggctttgaccaggcggcacttcgccgccgcggaatccgagctggttccg
tttatcgaagacgcgttcccccgcgacggcgccgcaagcgaactgctgttcatccggacg
aagccgggcaccgatacgggcatctccgtgacgctgacgccggacggcgatctgatcgat
tacgcggccgatcccgggctgtaccacgaagccgaccggcagatacgcctggaaccggac
gaactgctggagatcggcgaacgtttcgtgcgggatcattatcccgacgcgttcgagcag
ttcaacggcccggagaccgaagaccgcggcgaccgcctcttcttcacgttcagccagcat
gccgccggaatgccgctgccccgttcgggattctggatcgacctgcaccgcgccggattc
gtgacgggattcaaatatttcggcgcgagagcggagcctgctctgccggatgggctgtta
acgcccgaacaggtgctggagcagatcgaccgggagctggagctgaacctgcatttcatg
acgctgcacgaagaagtgcatgtgccgggcgacaaccggctgcatctggtctatatgccg
aatccgtatctgacccatcgttccgcgctgcttccgagctcgcagccggcgcggcctggg
gcaggcgatttgcctgccgcggacatccctgacccatgcgcgggaagccgcgaaccgatc
gcggactttatgcgccgcggcgttcggacggcgcttcccgatccggcagacctgccggaa
acgttgggcattcgggaagccgactacgaattgttgcgcgaacaaacgaccggccgcgag
aaaacggtcgtgtaccgccgccgggacgaaggcaagcctgtgggcgaacatggcggaacg
gccgaaagcgtcaaaccgtatacgctggacgattatatgcgcgaacgcctggaaggaacg
gtcaaactccggttcgatacggtcagcggccggctccgcggactgatgaacctgcacgaa
gaagtcggcgaattggacctaagcgacgatgcctgccttgagcttgcgctgacgctgctg
catgcggccgatccgctgctgtttccgtatttgcggctgaatgcgtccgatgaacctgat
ggacctgacacatctgatggacctgacaagtctgaagcggaacctccggcccggcgccga
acggcggctttcattttctccgtgtgcaaaaacggcgtaccgggctttttccatcaggtg
tcgatcaacgtgaatcgaacgacggggcgcgtcaccctttatatggatgccgatctggac
atggccgagctggaatcgctgccgctcgtcccttccctgtccgcggacgaagccaagcgc
cggctgctggccgcgctcgaaccgcgcctgacgtgggcgacggtctacccggacgacgat
tccggcgaaaagcgcgacgaacttcgttacgcgctcgtcgaccggaaatcgggccgcggc
attcggttgatcgacgcgcatacgggccagatcgtgacggacaaaaaccaaccgcctcta
ttggacagataa
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