Saccharomonospora xinjiangensis: EYD13_02415
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Entry
EYD13_02415 CDS
T05928
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sacc
Saccharomonospora xinjiangensis
Pathway
sacc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sacc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EYD13_02415 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sacc03021
]
EYD13_02415 (rpoA)
03400 DNA repair and recombination proteins [BR:
sacc03400
]
EYD13_02415 (rpoA)
Enzymes [BR:
sacc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EYD13_02415 (rpoA)
Transcription machinery [BR:
sacc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EYD13_02415 (rpoA)
DNA repair and recombination proteins [BR:
sacc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EYD13_02415 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QBQ58866
LinkDB
All DBs
Position
478488..479561
Genome browser
AA seq
357 aa
AA seq
DB search
MLISQRPALSEETVNETRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTEIILNLKELVVSSEEDEPVTMYLRKQGPGEVTAADIVPPSGVTVHN
PDLHIASLNGKGKLEIELVVERGRGYVPALQNKQAGAEIGRIPIDSIYSPVLKVTYKVEA
TRVEQRTDFDKLVIDVETKPSITPRDAVASAGKTLVELFGLARELNVDAEGIEIGPSPQE
ADTIAAYAMPIEDLDLTVRSYNCLKREGIHTVGELVSRSEADLLDIRNFGAKSIDEVKMK
LVGLGLTLKDSPPGFDPTAAASTYESGGETWGAETPSPGLPDTGHDDGQDYAETEQL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatttcccagcggccggctctcagcgaggagacggtcaacgagacacgctcgcgg
ttcaccatcgaaccgctcgaacccggcttcggttacaccctgggcaactcgctccggcgg
acgttgctgtcgtcgattccgggtgccgcggtcacgagcatccgcatcgatggcgtgttg
cacgagttcaccaccgtgccaggggtgaaggaagacgtcaccgagatcatcctgaacctc
aaggaactcgtcgtctcctcagaggaggacgagcccgtcacgatgtatctgcgcaagcag
ggccccggtgaggtcaccgcagccgacatcgtgccgccgtccggcgtcaccgtgcacaat
ccggatctgcacatcgcgtcgctgaacggcaagggcaagctcgagatcgagctcgtcgtc
gaacgcggccgcggttacgttcccgcgctgcagaacaagcaggccggagccgagatcggt
cgtattcccatcgactcgatctattcgccggtgctgaaggtgacctacaaggtcgaggcc
acccgtgtcgagcagcgcacggacttcgacaagctcgtaatcgacgtcgagaccaagccg
tcgatcacgccgagggatgctgtcgcctcggcgggcaagacgctggtcgagctgttcggg
ctcgcgcgcgagctgaacgtcgatgcggagggcatcgagatcggaccgtcgccgcaggag
gcggacaccatcgccgcctacgcgatgccgatcgaggacctcgacctcacggtgcgttcg
tacaactgcttgaagcgcgagggaattcacacggtcggcgagctggtttcgcgcagcgag
gcggacctgctcgacatccgcaacttcggggcgaagtcgatcgacgaggtgaagatgaag
ctcgtcgggctcggcttgaccctgaaggacagcccgcccggattcgaccccaccgccgcc
gcttccacgtacgagagcggtggcgagacctggggcgcggagacgccgtcgccgggcctt
ccggacactggccacgacgacggccaggactacgcagagacggagcagctgtaa
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