Saccharomonospora xinjiangensis: EYD13_05375
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Entry
EYD13_05375 CDS
T05928
Symbol
sigD2
Name
(GenBank) RNA polymerase sigma-D factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
sacc
Saccharomonospora xinjiangensis
Pathway
sacc02020
Two-component system
sacc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sacc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EYD13_05375 (sigD2)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EYD13_05375 (sigD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sacc03021
]
EYD13_05375 (sigD2)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sacc02035
]
EYD13_05375 (sigD2)
Transcription machinery [BR:
sacc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EYD13_05375 (sigD2)
Bacterial motility proteins [BR:
sacc02035
]
Flagellar system
Flagellar assembly proteins
Stator
EYD13_05375 (sigD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
Sigma70_ECF
UPF0122
KORA
SMP_2
Motif
Other DBs
NCBI-ProteinID:
QBQ59446
LinkDB
All DBs
Position
1126508..1127386
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AA seq
292 aa
AA seq
DB search
MGQTVQGPPAGNRADGVPGPTTEAGAGGDREEAVTEPAESAIQALWREFARSPSQRVRDR
LVLHYAPLVKYVAGRVGTGLPTHIDVADLIQSGIFGLVDAIEKFDPHRGLRFETYAMQRI
RGAILDDLRSQDWVPRVVRSRAREIERAHERLGARLRRTPTDAEVAAELGISLRDLRDLY
GQLRLTSVLALDDLVGPNRDSSGVGSPADTLPDDDAVDPAAVLVDQDNRKQLAEAIAQLS
ERDRIVVSLYYFENLTLAEIGKVLGVTESRVSQLHTRAVLRLRAKLVENAGS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtggggcagaccgtccagggcccgcctgcgggcaaccgcgcggacggtgtcccaggcccc
acaacggaagccggtgcgggcggcgaccgcgaggaagccgtgaccgaaccggccgagtcg
gccatccaggcactgtggcgggagttcgcccgctctccgagccagcgtgtccgggatcgt
ctcgtcctccactacgcgccgctggtgaaatacgtcgcgggcagggtcggtacgggcctt
cccacgcacatcgacgtggccgacctgatccagtcgggcatattcggccttgtcgatgcc
atcgagaaattcgaccctcaccggggcctgcggttcgagacgtacgccatgcagcgcatt
cgcggcgccatcctcgacgacctccgttcgcaagactgggttcccagggtggtccggagc
agggcgcgcgagatcgaacgcgctcacgaaaggctcggcgcgcggctgcgccgcacaccc
accgacgccgaagtcgcggccgaactcggcatctcactgcgggacctgcgggatctctac
ggacaactcaggctgacgagtgtgctcgccctcgacgacctcgtgggaccgaacagggac
agcagcggtgttggctcgcccgccgacacgttgccggacgacgacgccgtcgatcccgcc
gccgtcctcgtcgatcaggacaaccgcaaacaactggcggaagccatcgcacagctcagc
gagcgcgaccgcatcgtggtgagcctctactacttcgagaacctcacgctcgccgagatc
ggcaaggtgctcggagtgaccgaatcccgggtgagccagctgcacacccgtgccgtcctt
cggctgcgcgcgaaactggtggagaacgcgggttcgtga
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