Saccharomonospora xinjiangensis: EYD13_05855
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Entry
EYD13_05855 CDS
T05928
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sacc
Saccharomonospora xinjiangensis
Pathway
sacc03030
DNA replication
sacc03430
Mismatch repair
sacc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sacc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EYD13_05855 (polC)
03430 Mismatch repair
EYD13_05855 (polC)
03440 Homologous recombination
EYD13_05855 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sacc03032
]
EYD13_05855 (polC)
03400 DNA repair and recombination proteins [BR:
sacc03400
]
EYD13_05855 (polC)
Enzymes [BR:
sacc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EYD13_05855 (polC)
DNA replication proteins [BR:
sacc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EYD13_05855 (polC)
DNA repair and recombination proteins [BR:
sacc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EYD13_05855 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DUF7508
Motif
Other DBs
NCBI-ProteinID:
QBQ59541
LinkDB
All DBs
Position
complement(1224530..1226239)
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AA seq
569 aa
AA seq
DB search
MQLAFDELGTPLREVTFVVVDLETTGGAPDGGNITEIGAVKVRGGRILGEFATLINPGTS
IPPQIVALTGITTAMVHHAPRIEEVLPSFLEFADGAVLVAHNAGFDTSFLKAACGRHGYA
WPNPTVLCTLKLARRVLRREHTPRRSHRLSALAALFGSTTTPNHRALDDARACVDVLHGL
LERVGSLGVQSLEELLDYLPDVTPAQRRKRDLAAGLPERPGVYLFRGPSGEVLYVGTASN
LRRRVRQYFTSSESRGRIKEMVALAERVEAVECAHSLEAAVRELRLLAAHRPAYNRRSRN
PGKVWWVVLTDEPFPRLAVVRRPRDGAFGPFSSQAGAKAAAATLADIAGLRTCTPRIPAT
GASSRPCVLAELGSCGAPCAGKQSVDEYRPSVRLVSGLVSGTDATALALGSAKLAEIASA
HRFERAARRRDELASLLRAVGKHHRLTALAAIGELVAAAPDGTGGWEFAVVRHGRLASAG
VARRGVPPLPVVDSLVAAAETVLPGPGPLRGANPEETALLWRWLTRPGVRLVRTSTPWAE
PLHGAGRWQSWLNAADTAVALEAVGDAAG
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgcgttcgacgagctgggcactcccctgcgcgaggtcaccttcgtcgtcgtg
gacctggagaccaccggcggtgctccggacggcggcaacatcaccgagatcggcgccgtc
aaggtcagaggtggccggatactcggcgagttcgcgaccctgatcaatccgggcacctcc
atcccgccgcagatcgtggcactcaccggcatcacaaccgcgatggtccaccacgctccc
cggatcgaggaggtccttccctcgttcctcgaattcgccgacggcgcggtgctggtggcc
cacaacgccggattcgacacgtcgttcctcaaggcggcgtgcggcaggcacggctacgcc
tggccgaaccccaccgtgttgtgcacgctcaagctcgcgcgcagggtgttgcggcgggag
cacacaccacggcggagtcaccggctctccgcactcgccgccctgttcggctccacaacc
acaccgaaccatcgcgctctcgatgacgcccgagcatgcgtggacgttctgcacggcctc
cttgagcgcgtcggttcactcggggtgcagtcgctggaggagctgctcgactacctgccc
gacgtcacaccggcgcaacgccgcaagcgtgatctcgccgcgggcttgccggaacgcccc
ggcgtctacctgttccgcggcccgtccggcgaggtgctctacgtgggcaccgcgagcaac
ctccgccgcagggtgcggcaatacttcacgtcgtccgaaagccgtggccgcatcaaggag
atggtggcgctcgccgagcgggtcgaggccgtcgagtgcgcgcattccctcgaagctgcc
gtgcgggaactccggttgctcgccgcacaccggcccgcgtacaaccgccgttcccgcaat
cccggcaaggtgtggtgggtggtgctcaccgatgagccgttcccgcgcctggccgtcgtc
cgccgtccccgcgacggagcgttcggccctttcagttcccaggcaggcgcgaaggccgct
gcagccacgctcgccgacatcgccgggctgcgcacctgcacgccgcgcattcccgccacc
ggcgcgtccagccgtccctgcgtgctggctgagctgggcagctgcggggctccctgcgca
ggaaagcagagcgtggacgagtaccggccgtcggtgcggctggtgtccggcctcgtgagc
ggtaccgacgccacggcgctcgccctcggcagcgccaagctggccgagatcgcctcggct
caccgcttcgagcgtgcggcccgccgaagggacgagctggcctcgctgctccgtgccgtc
ggcaagcaccatcggctcacggcgctggccgccatcggcgagctcgtcgccgccgcaccc
gacggcacgggaggctgggagttcgccgtcgtacgccacggcaggctcgcctcagccggt
gtcgccaggcgcggtgtgccgccgctgccggtggtcgattccctcgtggcggctgccgag
acggtcttgccgggccctgggccgttacggggagccaatcccgaggagaccgcgctgctg
tggcgctggctcacacgccccggagtccggctcgttcgcacgtccacaccgtgggccgaa
ccgttgcacggcgcgggtcgatggcagtcctggctgaacgcggcggacacggcggtcgcg
ctggaggctgtcggcgacgccgcagggtga
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