Saccharomonospora xinjiangensis: EYD13_07180
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Entry
EYD13_07180 CDS
T05928
Symbol
gcvP
Name
(GenBank) Glycine dehydrogenase (decarboxylating)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
sacc
Saccharomonospora xinjiangensis
Pathway
sacc00260
Glycine, serine and threonine metabolism
sacc00630
Glyoxylate and dicarboxylate metabolism
sacc00670
One carbon pool by folate
sacc00785
Lipoic acid metabolism
sacc01100
Metabolic pathways
sacc01110
Biosynthesis of secondary metabolites
sacc01200
Carbon metabolism
Module
sacc_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sacc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EYD13_07180 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EYD13_07180 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
EYD13_07180 (gcvP)
00670 One carbon pool by folate
EYD13_07180 (gcvP)
Enzymes [BR:
sacc01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
EYD13_07180 (gcvP)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QBQ59802
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All DBs
Position
1489974..1492871
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AA seq
965 aa
AA seq
DB search
MSVSSSAPPPPVPAAQAPPAFVSRHVGPGPSDQAKMLAECGFGSVDALVAAAVPSAIRTS
DELRLPEPASEEQAIAELRELARRNRPMTQMIGLGYHDTVTPAVIRRNVLENPAWYTAYT
PYQPEISQGRLEALLNFQTVVSDLTGLATANASLLDEGTAVAEAVMLMKRAAKSRSNTVV
VDAECLPQTVAVVRTRAQAVGVEVEVRDLSLGLPEEFFGVVVQYPGVSGVLRDPGFYEGI
AEAAHRAKALYCVAADLLALTLLTAPGEFGADLAAGTTQRFGVPLGYGGPHAGYLAVRSG
LERSLPGRLVGVSIDAAGAPAYRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYH
GPDGLRRIAERVHGHAVALADALRAGGVEIVHDHFFDTVLARVPGRAEAVLASAREAGVN
LGRVDADHVRVACDEVTTPEVLAVVLGAFGVEGAPAFAARSALPSGLERTGEYLTHEVFH
TYRSETAMLRYLRRLADSDYALDRGMIPLGSCTMKLNATTEMEPVTWPEFANIHPFAPSE
DAGGYHELVAQLSAWLAEVTGYDSVSLQPNAGSQGELAGLLAIRAYHRANGQPERDVCLI
PSSAHGTNAASAVLAGMRVVVVACTADGDVDLDDLRAKADAHRDTLAAIMVTYPSTHGVY
EAGIGELAEIVHEAGGQVYVDGANLNALLGLAKPGEFGGDVSHLNLHKTFCIPHGGGGPG
VGPVAVRAHLAPYLPNHPLSAEAGPETGIGPISAAPFGSASILPISWAYVRMMGAEGLTE
ATKIAVLNANYVAARLAPHYPVLYTGQNGLVAHECILDLRGITKQTGVTVDDVAKRLIDY
GFHAPTMSFPVPGTLMVEPTESEDLAELDRFCEAMIAIRHEIDEVANGTWPVEESPLRGA
PHTAEQLAGDWTLPYDRRTAVYPGRTSPKGKYWSPVRRIEGAYGDRNLVCSCPPVSSYES
AGSPS
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgtcatcctcggcgcccccgccgcccgttccggccgcgcaggcaccaccggcc
ttcgtctcccggcacgtcggtccagggccgtccgaccaggccaagatgctggccgagtgc
ggcttcggcagcgttgacgccctcgtcgccgccgccgtgcccagcgcgatccgcaccagc
gacgagctgcggcttcccgagccggcctccgaggagcaggccatcgccgagctgcgcgaa
ctggcgcgccgcaaccggccgatgacccagatgatcggcctcggctaccacgacaccgtc
acaccggccgtcatccgccgtaacgtgctggagaacccggcctggtacacggcctacacg
ccgtaccagccggagatctcgcaggggcggctcgaagcgctgctcaacttccagaccgtg
gtctccgacctcaccgggctcgccacggccaacgcctcgctgctcgacgagggcacagcc
gtcgccgaggccgtgatgctcatgaagcgtgccgcgaagtcgcggtccaacacggtggtc
gtcgatgcggaatgcctgccgcagaccgtcgcggtggtccgcacccgcgcgcaggccgtg
ggcgtcgaggtcgaggtccgcgacctgtcgctgggtcttcccgaggagttcttcggtgtc
gtggtgcagtacccaggggtttccggggtgctgcgcgatcccggcttctacgagggaatc
gcggaggcagcgcaccgcgccaaggcgctgtactgcgtcgcggccgacctgctcgcgctg
acgctgctgaccgcgcccggcgagttcggagccgacctcgcggctggcacgacgcaacgc
ttcggcgtcccgctcggctacggcggcccgcacgccggatacctcgccgtgcggtcgggg
ctggagcgctcgctgccgggcaggctcgtcggggtctccatcgacgcggccggtgcgcct
gcctaccggctcgcgttgcagacacgcgagcagcacatccggcgtgagaaggccacgagc
aacatctgcaccgcccaggtgctgctggccgtgatggcgtcgatgtacgccgtttaccac
ggccccgacggtctgcgccgcatcgccgagcgggtgcacgggcacgcggtcgcgctggcc
gacgcgctgagggccggtggcgtcgagatcgtccacgaccacttcttcgacaccgtgctc
gcccgcgtgccaggccgtgcggaggccgtgctcgcctcggcgcgggaggcgggcgtcaac
ctcggccgcgtggatgccgaccacgtgagggtggcctgcgacgaggtgaccacgccggag
gtgctggccgtggtcctcggcgcgttcggcgtcgagggcgcccctgcctttgcggcgcgt
tcggcgctgccctccgggctggagcgtaccggcgagtacctcacgcacgaggtgttccac
acgtaccggtcggagaccgcgatgctgcgctacctgcgcaggctcgccgactccgactac
gcgctcgaccggggcatgatcccgctcggctcgtgcacgatgaagctcaacgccaccacc
gagatggagccggtgacctggccggagttcgcgaacatccacccgttcgcgccctcggag
gacgccgggggataccacgagctcgtggcgcaactctccgcgtggctcgccgaggtcacc
ggctacgacagcgtgtcgctgcaacccaacgcgggcagccagggtgaactcgccggtctg
ctggccatcagggcctaccatcgcgcgaacgggcagcccgaacgcgacgtgtgcctcatc
ccgtcgtcggcgcacggtaccaacgccgcgtccgccgtgctcgccgggatgcgggtggtc
gtcgtcgcgtgcacggccgacggcgacgtggacctcgacgatctgcgggccaaggccgac
gcccaccgcgacaccctcgccgcgatcatggtcacctacccctcgacacacggcgtgtac
gaggcgggcatcggtgagctggcggagatcgtgcacgaggcgggcgggcaggtctacgtc
gatggcgccaacctcaacgctctgctcggcctcgccaagccgggcgagttcggcggcgac
gtctcccatctcaacctccacaagaccttctgcatcccgcacggtggtggaggaccgggt
gtcgggcccgtcgcggtgcgcgcgcatctcgcgccgtacctgccgaaccacccgctgagc
gccgaggccggtcccgaaaccggtatcggcccgatctcggccgcgccgttcggctcggcg
tcgatcctgccgatctcctgggcctacgtgcgcatgatgggcgcggaagggctcaccgag
gccaccaagatcgccgtgttgaacgccaactatgtggcggcacggctcgcgccgcactac
ccggtgctctacaccggtcagaacgggctggtcgcccacgagtgcatcctcgaccttcgc
ggcatcaccaagcagaccggagtcacggtcgatgacgtcgccaagcggctcatcgactac
ggcttccacgcgccgaccatgtcgttccccgttcccggcaccctcatggtggagcccacc
gagagcgaggacctcgccgaactcgaccgcttctgcgaggcgatgatcgcgatccgccac
gagatcgacgaggtggccaacggcacctggcccgtcgaggaaagcccgctgcgaggagct
ccgcacacggccgagcagctcgcaggcgactggacgctgccctacgaccggcgcactgcc
gtctaccccggccgcacctcacccaagggcaagtactggtcgccggtgcggcgcatcgaa
ggcgcctacggagaccgcaacctcgtgtgctcctgcccacccgtgtcctcctacgaaagc
gcaggttcgccgtcgtga
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