Saccharomonospora xinjiangensis: EYD13_08335
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Entry
EYD13_08335 CDS
T05928
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sacc
Saccharomonospora xinjiangensis
Brite
KEGG Orthology (KO) [BR:
sacc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sacc03016
]
EYD13_08335 (truB)
Enzymes [BR:
sacc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EYD13_08335 (truB)
Transfer RNA biogenesis [BR:
sacc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EYD13_08335 (truB)
Prokaryotic type
EYD13_08335 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QBQ60028
LinkDB
All DBs
Position
1770097..1770993
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AA seq
298 aa
AA seq
DB search
MSALAPPPGLLIIDKPGGMTSHDVVAKVRRFLRTRKVGHAGTLDPMATGVLVLGIERATK
LLGHLALDRKTYLATIALGAATTTDDAEGEVISRADGPAVAAVSDAEIEAGIAALTGDIL
QKPSAVSAIKVGGKRAYAMVRAGEDVDLPARPVSVYRFDLLATRRDAGSLELDVLVDCSS
GTYVRALARDLGAALGVGGHLAALRRTSAGPFTLAKARTLDDVEREPGLSLTLAEAVAAA
FPRADVDAPSAAAIRHGQRLPATGLSGTYGVFAPDGSVLALAEDTGHTARPVVVLDPA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgccctcgctccccctcccggactgctgatcatcgacaaacccggggggatgacg
tctcacgacgtcgtcgccaaggttcgccggttcttgcgcacccgcaaggtcggtcacgcg
gggacgctcgatcccatggccaccggagtgctcgtgctcggcatcgagcgtgccaccaag
ctgctcggccacctcgcgctcgaccgcaagacctacctcgccacgatcgcgctcggcgcg
gcgaccacgaccgacgacgccgagggagaggtcatctcccgcgcggacggccctgccgtc
gccgctgtctccgacgccgagatcgaggccgggatcgccgcgctcaccggtgacatcctc
cagaaacccagcgcggtgagcgcgatcaaggtcggagggaagcgggcgtacgccatggtg
cgcgcgggcgaggacgtggaccttcccgcgaggcccgtcagcgtgtaccgcttcgacctg
ctggccacccgcagggacgccggaagcctcgaactcgacgtgctggtggactgctcgtcg
ggtacctacgtgcgcgcgctggcccgtgacctcggtgccgcgctgggtgtcggtggtcac
ctcgccgcgttgcggcgtacgtccgcgggcccgttcacgctggcgaaggcccgcaccctc
gacgacgtcgagcgcgagcccggcctgtcgctgaccctcgccgaggcggtggccgcggcc
tttcctcgcgcggacgtggacgcgccgtcggccgccgcgatccggcacgggcagcggctc
cccgcgacggggctttccggaacctacggcgtgttcgcgccggacggcagtgtgctcgca
ctggccgaggacacggggcacaccgcgcggccggtggtcgtgctcgaccccgcgtga
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