Saccharomonospora xinjiangensis: EYD13_14020
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Entry
EYD13_14020 CDS
T05928
Symbol
rimO2
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sacc
Saccharomonospora xinjiangensis
Brite
KEGG Orthology (KO) [BR:
sacc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sacc03009
]
EYD13_14020 (rimO2)
Enzymes [BR:
sacc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EYD13_14020 (rimO2)
Ribosome biogenesis [BR:
sacc03009
]
Prokaryotic type
ribosomal protein modification factors
EYD13_14020 (rimO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
DUF3079
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QBQ61156
LinkDB
All DBs
Position
complement(3030618..3032060)
Genome browser
AA seq
480 aa
AA seq
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MSSAESSPHRRVSLLTLGCARNEVDSEELAGRLVAGGWELSDDPAASDVVVVNTCGFVEQ
AKKDSVDTLLEAADTGAKVVAVGCMAERYGRELAQNLPEADAVLGFDHYPHLADRLADIA
EGRRVESHTPADRRTLLPITPVERQAAAEDVTVPGHGSWGPRVLRTRLDDSPVAALKIAS
GCDRRCSFCAIPSFRGSFVSRHPDELVAEAQWLASQGVRELFLVSENSTSYGKDLGRDLG
GTRALELLLPRLAAVEGVERVRVSYLQPAETRPDLVKVIATTPGVADYFDLSFQHSSETV
LRRMRRFGSTESFLALIEQIRSYAPEAGIRTNVIVGFPGETEEDLAELERFLTEARLDAV
GVFGYSDEDGTEAETFDGKLDPSEVTERVGRVAALVEELTAQRAEDRIGSVVDVLVESVE
EEIVGRAAHQAPEVDGECVVLGDLDCEVGQLIRCEVVDSAGVDLVVRPAGAAAGAPDSTT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtgtctagcgccgaatcctcgccccaccgcagggtctccctcctgacgctcgggtgtgcc
cgcaacgaggtcgattccgaggagctcgcaggccgtctcgtggccggaggatgggaactc
agcgacgaccccgccgccagcgacgtcgtcgtggtgaacacctgtggcttcgtcgaacag
gcgaagaaggactcggtggacaccctgctcgaggcagcggacacgggagcgaaggtcgtc
gccgtcgggtgcatggccgagcggtacggcagggaactcgcgcagaacctgccggaggcc
gacgccgtgctcggcttcgaccactatccccacctggccgaccggctcgccgacatcgcc
gagggcaggcgcgtcgagtcgcacacaccggccgaccgcaggacgctgctgccgatcacc
cccgtcgagcggcaggccgctgcggaggacgtgaccgtgccgggccacgggagctggggc
ccgcgcgtcctgcggaccaggctcgacgattcgcccgtcgcagcgctcaagatcgcgtcg
gggtgtgaccgccgctgctcgttctgcgccatcccgtcgttccgaggttcgttcgtgtcc
cgccatcccgacgagctggtcgccgaagcgcagtggctcgcctcccagggcgtgcgcgag
ctgttcctcgtgagcgagaactcgacgtcgtacggcaaggacctcggccgtgacctcgga
gggacgcgggcactggagctgctgctgccgaggctggccgccgtcgagggcgtggagcgg
gtgcgggtttcgtacctccagcccgccgagacccgccccgatctcgtcaaggtcatcgct
acgacccccggtgtcgccgattacttcgacctgtcgttccagcactccagcgagacggtg
ctgcggcgcatgcggcggttcggctcgacggagtcgttcctggcactgatcgagcagatc
cggtcctacgcgccggaggcgggtatccgtaccaacgtcatcgtcgggtttcccggcgag
acggaggaggatctggccgagctggaacggttcctcaccgaggcacggctcgacgcggtg
ggcgttttcgggtactccgacgaggacggcaccgaggccgagacgttcgacggcaagctg
gacccctccgaggtcaccgagcgcgtcggcagggtggcggcgctggtcgaggaactcacc
gcgcagcgggccgaggacaggatcggttcggtggttgacgtgctcgtcgagtcggtggag
gaggagatcgtgggcagggcggcgcaccaggctcccgaggtggacggcgagtgcgtcgtg
ctcggcgacctcgactgtgaggtcggtcagctgatccggtgcgaggtcgtggacagcgcg
ggtgtcgatctggtcgtgcgtcccgcaggggcggcggccggtgccccggactccacgacg
tga
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