Saccharomonospora xinjiangensis: EYD13_14885
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Entry
EYD13_14885 CDS
T05928
Symbol
sigF2
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sacc
Saccharomonospora xinjiangensis
Brite
KEGG Orthology (KO) [BR:
sacc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sacc03021
]
EYD13_14885 (sigF2)
Transcription machinery [BR:
sacc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EYD13_14885 (sigF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_24
HTH_Crp_2
MarR
DUF7343
Sigma70_ECF
HTH_3
MarR_2
HTH_31
HTH_Tnp_4
GerE
HTH_IclR
Trp_repressor
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
QBQ61325
LinkDB
All DBs
Position
3226694..3227494
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AA seq
266 aa
AA seq
DB search
MTPDEQSRVEARAQGGGSSGYEDLAPLFNTLAALDPEDPRRTAVRDEIITRCLPLAEHIA
RRFVGRGEPRDDLVQVARLGLLNAIDRFDASRGTEFVAFAVPTIMGEVRRHFRDSSWAVR
VPRRLKELHLSLSQASGKLAQRLGRAPTPSELAAELDLSPEDVWDGLLAGNAYQSVSMDA
AYDDEGTLPLAETVGEDDVQLENVEFHESLQPLLASLPERERRVLILRFFGNMTQTQIAE
RVGISQMHVSRLLARTLEFLRGKLTE
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
gtgacccctgacgagcaatcccgcgttgaagcgcgcgcgcaagggggaggctcaagcgga
tacgaggatctcgctccactgttcaacacgctcgccgctctcgatccggaggacccgaga
aggacggccgttcgcgacgagatcatcacccgctgcctgcctctcgccgagcacatcgcc
cggcggttcgtcggccgtggcgagccgcgtgacgatctggtgcaggtcgcgaggctgggg
ctgctcaacgccatcgaccgcttcgacgcctcacggggcaccgaattcgtcgccttcgcc
gtgcccacgatcatgggcgaggtccggaggcacttccgcgattcgagttgggcggtccgc
gtgcccaggaggttgaaggaactccacctttcgttgagccaggcgagcggcaaactcgcc
cagaggctgggccgtgccccgacgccgagcgaactcgccgccgaactcgacctctccccg
gaggacgtctgggacggattactcgcgggcaacgcctatcagtcggtgtccatggacgcc
gcctacgacgacgagggcacgctgccgctcgccgagaccgtcggcgaggacgacgtgcaa
ctggagaacgtcgagttccacgagtcgctgcaaccgctgctcgcgagtcttcctgaacgg
gaacggcgggtgctcatcctgcgtttcttcggcaacatgacccagacccagatcgccgaa
cgtgtcgggatctcccagatgcacgtgtcccggctgctcgcccgcacgctggagttcctt
cgcgggaagctcaccgagtga
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