KEGG   Saccharomonospora xinjiangensis: EYD13_15250
Entry
EYD13_15250       CDS       T05928                                 
Name
(GenBank) putative ATP-dependent helicase Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sacc  Saccharomonospora xinjiangensis
Brite
KEGG Orthology (KO) [BR:sacc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sacc03400]
    EYD13_15250
Enzymes [BR:sacc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EYD13_15250
    5.6.2.6  RNA 3'-5' helicase
     EYD13_15250
DNA repair and recombination proteins [BR:sacc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    EYD13_15250
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr WH3_Lhr WH2_Lhr Helicase_C ResIII AAA_25 DUF6406 T4SS-DNA_transf
Other DBs
NCBI-ProteinID: QBQ61398
LinkDB
Position
3311143..3315762
AA seq 1539 aa
MLEIFSPATRNWFAGAFAEPTAAQEGAWRAAQRGEHALVVAPTGSGKTLAAFLWALDRLA
TTGPPEEARRARRCRVLYVSPLKALAVDVQRNLRAPLAGISQASRRLGMEPPDITVGTRT
GDTTPAERRAFTRTPPDILVTTPESLFLLLTSSARESLRGVETVIIDEVHAVAGSKRGAH
LALSLERLDDLLDRPAQRIGLSATVRPVDEVSAFLTGGRPARVVQPALSKTIEVRVEVPV
EDMGELDARPTRAEPAPLPSESDPDDDLAAPERPRRPSIWPAVEERVLDLVRAHRSTIVF
ANSRRLAERLTARLNELAAEREEVAAEGREHDFPAEAVGQSGVTRPQGNAAPVVAKAHHG
SMSREQRSSVEEGLKSGTLPCVVATSSLELGIDMGAVDLVVQIEAPPTVASGLQRVGRAG
HHVGAVSTGVMFPKFRGDLVSCAVVAERMAEGAIEAVRYPRNPLDVLAQHVVAMVAVEPR
TVDDVAATVRRAAPFAALPDDALHAVLDMLAGRYPSEEFGELRARITWDRVTGVLRGRPG
AQRLAVTSGGTIPDRGLFTVVTPGDGDRPGSRVGELDEEMVYESRVGDTILLGTSSWRIT
DITHDRVVVIPAPGEAARMPFWRGDAQGRPLELGRALGRFVRFLSTSDRDKALRRAEEAG
LDEWAAANLVAYIDEQREATRHVPSDRTVLLERFRDELGDWRVVVHSPFGAQVNAPWALA
VAARLRDNRGVDAQVAHSDDGIVLRLPDALDDEGREVVIGAEDVLLDPDEVESLITTEVS
GSALFAARFRECAARSLLLPRRDPRRRTPLWQQRQRASQLLGVAARYERFPVVLEAMREC
LQDVYDVGGLRELMGDIAARSVRVVEVETPSASPFARSLLFGYVGMFLYETDAPLAERRA
AALSLDSALLAELLGTEAIRELLDADVVAEVERSLQRLEPDRHARSPEDAADLLSFLGDL
TKEEARARGVLPEWLDQLVAERRAIVVRIAGQERHLAVEDAGRVQDALGTALPVGVPEVF
TEPVADPLGDLLRRYARTRGPFAAQEAAARFGLGLAVVTGVLDRLTVEGALVRGELRPRG
HEAGTEYCDATVLRRLRRASLARLRAEVEPVERAALGRFLPSWHGIGARRGSRWTPNADD
VLSVVEQLAGAPLPASALESLVLPSRLPGYQPALLDELMVAGEVSWCGCGALAGGDGWIA
LAPSDVAEALLPDVEDTSTHGPLHAAIGSALEGGGLFFRQIVERVSLVLDEPVTDAGVAA
ALWDLVWAGIVSGDTLAPLRAQVAGKGAAHKPRRSAPRGRYARLRAARPAMPSRTGPPSV
AGRWGLVPGREPDPTRRAHARTESFLERHGVLTRGALDTERVSGGFSGIYRVLRGMEDSG
QVVRGYVVEGLGAAQFAARGAVDRLRAVSEAGGWVARQRAVVLAAADPAQPYGAALPWPA
AVGDTKHRPARKAGALTVLVDGVPALYVERGGRSLLSFTDDAITLRAAAGALSDAVRDGW
LGQLQVQRADGEQVLTSEMAAVLREAGFRATPKGLRLRA
NT seq 4620 nt   +upstreamnt  +downstreamnt
gtgctggagatcttctcccctgccacaaggaattggttcgcgggggccttcgccgaaccg
acggcggcacaggagggggcgtggcgagccgcgcagcggggagagcacgcgctcgtcgtc
gcaccgaccgggtccggcaagacgctggccgcgttcctgtgggcgctcgacaggctggcc
acgaccggccctccggaggaggcacggcgcgcccgtcgctgccgggttctgtacgtctcc
ccgctcaaggcgctcgccgtggacgtccagcgcaacctgcgggctccgctcgccgggatc
tcgcaggcgtcccgcaggctggggatggaacctccggacatcaccgtgggcacgcgcacc
ggcgacaccacaccggccgaacgcagggcgttcacgcgcaccccgcccgacattctcgtg
accacgcctgagtcgctgttcctgctgctgacgtcgtcggcgcgggaatcgctgcgcgga
gtcgagactgtgatcatcgacgaagtccacgccgtcgcgggcagcaagcgcggcgcgcac
ctcgcgctgtcgctcgaacggctcgacgatctgctcgaccggccggcacagcgcatcggc
ttgtccgccacggtgcggccggtggacgaggtgagcgcgttcctcaccggcggcaggccg
gctcgtgtcgttcaaccggcgttgagcaagacgatcgaggtcagggtcgaggtccccgtc
gaggacatgggtgagctggacgcccggcccacgagggcggaacccgccccgctgccgagt
gaatcggaccccgacgacgacctcgccgcgcccgagcggcctcgccgtccttccatctgg
cctgccgtcgaggaacgggttctcgatctcgtccgtgcgcatcgctccacgatcgtgttc
gccaactcgcgccgtctcgccgagcggctcaccgcccgcctcaacgagctggccgcggaa
cgggaggaggtcgccgcggagggaagggaacacgacttccccgccgaggccgtcggccag
tccggggtcacccggccgcaggggaacgcggcacccgtcgtcgcgaaggcgcatcacggc
tcgatgtcgcgggaacagcggagcagcgtcgaggagggcctgaagtcgggcacgctgccg
tgtgtggtggcgacctcgtcactggagctgggcatcgacatgggtgcggtggatctcgtg
gtgcagatcgaggcgccgcccacggtggcttcggggttgcagcgtgtcgggcgtgcgggc
caccacgtcggagcggtgtccacgggggtgatgttcccgaagttccgtggcgatctcgtc
tcgtgtgccgtggtggccgagcggatggccgagggcgccatcgaggccgttcgctacccc
cgcaatccgctggacgtgctggcgcagcacgtggtcgccatggtggccgtcgagccgcgc
accgtggacgacgtcgcggccaccgtgcgcagggccgcgccgttcgccgctttgccggac
gacgccctgcacgccgtgctggacatgctcgcgggccggtacccgagcgaggagttcggc
gagctgcgcgcgcggatcacgtgggaccgcgtcacgggtgtgttgaggggaaggcccggc
gcgcagcggctggccgtcacctcgggcggcacgatccccgaccgggggctgttcacggtg
gtcacccccggcgacggcgatcggccggggtcgcgcgtcggcgaactcgacgaggagatg
gtgtacgagtcgcgcgtcggcgacacgatcctgctcggcacgtcgtcgtggcggatcacc
gacatcacccacgaccgcgtcgtggtgatccccgcgcctggagaggccgcgcggatgccg
ttctggcggggtgacgcgcagggcaggccgctcgaactgggaagggcgctcggacggttc
gtgcggtttctgtccacatcggaccgcgacaaggcgctgcgccgcgcggaggaggccggg
ctcgacgaatgggccgcggcgaacctggtggcctacatcgacgaacagcgtgaggcgacc
cggcacgtgccgagcgaccggacggtgttgctggaacggttccgcgacgaactgggcgac
tggcgcgtcgtcgtccactccccgttcggcgcgcaggtgaacgcgccgtgggcactcgcg
gtggcggcgcgccttcgcgacaaccgtggggttgacgcccaggtggcccactccgacgac
ggcatcgtgctgcgcctgccggacgcgctcgacgacgagggcagggaggtggtgatcggc
gccgaggacgtgctgctcgatcccgacgaggtggagtcgctcatcaccacggaggtgagc
gggtcggcgttgttcgcggcccggttccgcgagtgcgcggcccgatccctgctgctgccc
cggcgagacccgcgcaggcgcaccccgctgtggcagcagcggcaacgcgcgtcgcaactg
ctcggtgtcgcagccaggtacgaacgcttccccgtggtgctggaggccatgcgggagtgc
ctccaggacgtctacgacgtcggcggtctgcgggagctgatgggcgacatcgcggcgcgt
tcggtgcgtgtcgtcgaggtcgagaccccgtcggcctcgcccttcgcccgcagcctgctg
ttcggctacgtcggcatgttcctctacgagaccgacgccccgctggccgaacggcgtgct
gcggcgctgtcgctcgactcggcgctgctggccgagctgctcggcaccgaggcgatccgc
gaactgctggacgccgatgtcgtcgccgaggtggaacggtcgctgcaacggctggaaccc
gaccggcacgcccgttctcccgaggacgccgccgacctgctgagtttcctcggcgatctc
acgaaggaggaggcgcgggcccggggagtcctcccagaatggctcgaccagctcgtggca
gagcggcgggcgatcgtggtgcgcatcgcggggcaggaacgccacctggccgtcgaggac
gcgggccgggtacaggacgcgctcggtactgctcttccggtgggggtgcccgaggtcttc
accgaacccgtcgcggacccgcttggcgacctgctgcggcgctacgcgcggaccaggggg
ccgttcgcggcgcaggaagccgcggcccggttcgggctcggtctcgccgtggtgaccggt
gtgctcgaccggctgaccgtcgagggcgcgctggtgcgcggtgagctacgccctcgggga
cacgaggccggcacggagtactgcgacgccaccgtgttgcgccgcctccggcgtgcgtcg
ctcgcccggctccgcgcggaggtcgaacccgtcgaacgcgcggctctgggccgtttcctg
ccgagctggcacggcatcggcgcccggcgcggcagccggtggacacccaacgccgacgac
gtgctgtcggtggtcgaacagctcgcgggcgcgccgctgcccgcgagcgcgctggaatcg
ctggtgctgccgagccgcctgcccggctaccagcccgcgctgctcgacgagttgatggtg
gcaggcgaggtgtcctggtgcggttgcggggcactggctggtggtgacggctggatcgcg
ctcgcaccatcggatgtggccgaggcactgctgccggacgtggaggacacctcgacgcac
gggcccctgcacgccgccatcgggtcggcgctggagggcggcgggctgttcttccgccag
atcgtcgagcgcgtgagcctcgtgctggacgagccggtcaccgatgccggtgtggccgcc
gcactgtgggatctcgtgtgggcggggatcgtctccggtgacacgctggccccgctgcgg
gcgcaggtcgcaggaaagggcgcggcgcacaaaccgcgcaggtcggcgccccggggtcgc
tacgcccggctcagagcggcgcggcctgccatgccgagccgtaccggcccgccctcggtc
gcggggcggtggggtctggttccgggccgcgagcccgacccgacccgtcgcgcccacgcg
cgcaccgagtccttcctcgaacggcacggggtgctcacgcgtggtgcgctggacacggaa
cgcgtcagtggtgggttttccggcatctaccgcgtacttcggggcatggaggactcggga
caggtggtgcgcggctacgtcgtggaagggctcggcgcggcgcagttcgccgcgcgcggg
gcggtcgatcgcctgcgcgcggtgtcggaggcaggcggctgggtggcgcggcaacgggcc
gtcgtgctcgccgcggccgaccccgctcagccgtatggtgccgcgctcccgtggcccgct
gcggtgggcgatacgaaacaccggcccgctcgcaaggccggagcgctgacggtgctcgtc
gatggtgttcccgccctgtacgtggaacggggaggccggtcattgctgtcgttcaccgac
gacgcgatcacgctgcgtgcggcggcgggagcgttgtcggatgccgttcgcgacggctgg
ctggggcagcttcaagtgcagcgagccgacggggaacaggtgctgacctcggaaatggcg
gcggtgctcagggaggccggtttccgcgcgactccgaagggcctgcggctgagggcgtga

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