Saccharomonospora xinjiangensis: EYD13_18465
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Entry
EYD13_18465 CDS
T05928
Symbol
recQ2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sacc
Saccharomonospora xinjiangensis
Pathway
sacc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sacc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EYD13_18465 (recQ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sacc03019
]
EYD13_18465 (recQ2)
03400 DNA repair and recombination proteins [BR:
sacc03400
]
EYD13_18465 (recQ2)
Enzymes [BR:
sacc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EYD13_18465 (recQ2)
Messenger RNA biogenesis [BR:
sacc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EYD13_18465 (recQ2)
DNA repair and recombination proteins [BR:
sacc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EYD13_18465 (recQ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HHH
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QBQ62032
LinkDB
All DBs
Position
3990934..3992757
Genome browser
AA seq
607 aa
AA seq
DB search
MGNPQTLDVLKRVFGYDSFRDNQQQIIDHVTGGGDALVLMPTGGGKSLCYQIPALVRDGV
GVVISPLIALMQDQVDGLRAAGVRAGYLNSTQDPDERRMVEAEFLAGELDLLYLAPERLR
GEATMRLVERGPVSVFAIDEAHCVSQWGHDFRPDYLALSALHERRPDVPRVALTATATPA
TRDEITTRLKLDNARVFVSSFDRPNIQYRIVPKKDPRKQVLDFLRAEHPGDAGIVYCLSR
RSVEETAEFLTRNGIEALPYHAGLDAGTRARHQSRFLREDGLVVVATIAFGMGIDKPDVR
FVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLSDVVAQRRLIDTSEGDAAHRRRLS
AHLDAMLALCETVDCRRARLLAYFGQDGAEDRCGNCDTCLSPPESWDGTVAAQKLLSTVV
RLRRERGQKFGAGQIIDILRGKLTPKVTQHRHDTLSVFGVGSDLGEGEWRAVVRQLLAAG
LLAVEGDYGTLVITESSDEVLFSGRTVPMRRDPVRVAVRTSRSTSSARAEPVELDAEAGA
VFERLRAWRAATAKEQGVPAYVIFHDATLRQIATLRPATRDELATVNGVGETKLNRYGEG
VLGVLTS
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtggggaatccgcagacactcgacgtcctcaagcgcgtcttcggctacgactcgttccgc
gacaaccagcagcagatcatcgatcatgtgaccggcggcggcgacgcgctcgtgctgatg
cccaccggtggcggcaagtcgctctgctaccagatccccgcgctggtgcgcgacggcgtc
ggtgtggtgatctcgccactgatcgcgctcatgcaggaccaggttgacgggctgagggcc
gccggtgtgcgcgccgggtacctcaactcgacacaggaccccgacgagcgccgcatggtg
gaggccgagttcctcgcgggcgaactcgacctgctctatctcgcgccggaacggctgcgg
ggcgaggccaccatgcggctcgtcgaacgcggtcccgtttcggtgttcgccatcgacgag
gcgcactgcgtctcccagtggggccacgacttccgtcccgactacctcgcgctgtcggcg
ctgcacgagcgtaggcccgacgtgccgcgcgtcgcgttgacggccacggccacccccgcc
actcgcgacgagatcaccacgcggctgaagctggacaacgcccgcgtgttcgtctccagc
ttcgaccggcccaacatccaataccggatcgtgccgaagaaggacccgcgcaagcaggtg
ctggacttcctgcgcgccgagcaccccggcgacgccggcatcgtctactgcctttcccgc
cgttcggtggaggagaccgccgagttcctcacccgcaacggcatcgaggcattgccgtac
cacgcggggctcgacgcgggaacgcgcgcgaggcaccagtcgcgttttctccgcgaggac
ggcctcgtcgtggtggccaccatcgcgttcggtatgggcatcgacaagcccgacgtgcgg
ttcgtggcacacctcgacctgcccaagtcggtcgagggctactaccaggagacgggacgc
gcggggcgtgacgggctgccgtccacggcgtggctcgcctacggcctctcggacgtcgtg
gcacagcgacggctgatcgacacctcggagggcgacgcggcacaccggcggcggctgtcc
gctcacctcgacgcgatgctcgcactgtgcgagacggtggactgccgcagggctcgactg
ctcgcctatttcggacaggacggcgcggaggaccgttgcggtaactgcgacacgtgcctt
tcgccaccggagtcgtgggacggcaccgtcgcggcgcagaaactgctctccaccgtcgtc
cgccttcgcagggaacgcggtcagaagttcggagcagggcagatcatcgacatcctgcgc
ggcaagctcaccccaaaggtcacccagcaccggcacgacaccctctcggtgttcggggtc
ggctccgacctcggtgagggtgagtggcgcgcggtggtgaggcagttgctcgccgcgggc
ctgctcgccgtcgagggcgattacggcacgctcgtcatcactgagtcgtccgacgaggtg
ctgttctcgggcaggacggtgccgatgcggcgcgatccagtgcgggtcgcggtgcgcacg
tctcgctcgacatcgtcggcacgtgccgagccggtggaactggacgccgaggccggagcg
gtgttcgagcggttgcgggcctggcgtgccgccaccgcgaaggaacagggcgtgccggcg
tatgtgatcttccatgacgcgacgttgcggcagatcgccacgctgcgcccggcgactcgc
gacgagttggcgacggtgaacggcgtcggagagaccaagctgaacaggtacggcgagggc
gtgctcggcgtcctgacctcctga
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