Saccharomonospora xinjiangensis: EYD13_19075
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Entry
EYD13_19075 CDS
T05928
Name
(GenBank) Type III restriction enzyme, res subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sacc
Saccharomonospora xinjiangensis
Pathway
sacc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sacc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EYD13_19075
09124 Replication and repair
03420 Nucleotide excision repair
EYD13_19075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sacc03021
]
EYD13_19075
03400 DNA repair and recombination proteins [BR:
sacc03400
]
EYD13_19075
Enzymes [BR:
sacc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EYD13_19075
Transcription machinery [BR:
sacc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EYD13_19075
DNA repair and recombination proteins [BR:
sacc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EYD13_19075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Motif
Other DBs
NCBI-ProteinID:
QBQ62154
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All DBs
Position
4115975..4117621
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AA seq
548 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEVDHGLAEDARIAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALTTYSRFPVPQPLLIDVVDTMGRFGRLQIQNHPAHGLVMATTDRAVLEEVL
RHKKISPMLGARIDDDTVVVHPSERGRLKQALLKVGWPAEDLAGYVDGESHPMSLAEDGW
ALRDYQRQAADAFWAGGSGVVVLPCGAGKTLVGAAAMARAQATTLILVTNTVAGRQWKRE
LVERTSLTEDEIGEYSGEKKEIRPVTIATYQVVTRRTKGEYRHLELFDSRDWGLVIYDEV
HLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWRDIEAQGWIAP
AECVEVRVTLTDAERLGYATAESEERYRLASTAHTKIGVISSIVEKHAGEPTLVIGAYLD
QLEELGAELNAPVVQGSTKNREREELFDAFRRGEIDKLVVSKVANFSIDLPEASVAIQVS
GTFGSRQEEAQRLGRLLRPKGDGRQAHFYSVVARDTVDTEYAAHRQRFLAEQGYAYRIVD
ADDLLRPL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatggccccctgatcgtccagtcggacaagacggtgctgctggaggtcgatcac
ggcctcgccgaggacgcacgcatcgccatcgcgccgttcgccgaactcgaacgcgctcct
gagcacgtccacacgtaccggatcaccccgctggcgctgtggaacgcccgcgctgcgggg
cacgacgccgagcaggtggtcgatgccctcaccacgtactcccggttccccgtgccgcag
cccctgctcatcgacgtcgttgacacgatgggccggttcggcaggctccagatccagaac
cacccggcccacggcctcgtgatggccacaaccgaccgcgcggtgctcgaagaagtcctg
cgccacaagaagatctccccgatgctcggcgcgcgcatcgacgacgacaccgtcgtggtg
catccctcggagcgaggcaggctgaagcaggcgctgctgaaggtcgggtggcccgccgag
gacctggcggggtacgtggacggcgaatcccacccgatgtcgctcgccgaggacggctgg
gcgctgcgggactaccagcggcaggccgccgacgccttctgggccggaggttcgggcgtg
gtcgtgctcccgtgcggagccggaaagacgctcgtgggcgccgcggccatggctcgggcg
caggcgacgaccctcatcctcgtcaccaacacggtcgcgggcaggcagtggaaacgcgaa
cttgtggagcgcacctcgctcaccgaggacgagatcggcgagtactcaggggagaagaag
gagatccgccccgtcaccatcgcgacgtatcaggtcgtcacccgccgcacgaagggcgag
taccgccacctcgaactgttcgactcgcgcgactggggactcgtcatctacgacgaggtg
cacctgcttcccgccccggtgttccgcatgacggccgacctccagtcgcgcaggcggctc
gggctcacggcgacgctcgtgcgtgaggacggccgcgagggcgacgtgttctccctcatc
ggccccaagcgctacgacgccccgtggcgcgacatcgaagcgcaagggtggatcgcaccc
gccgagtgcgtcgaggtgcgcgtcacgctcaccgacgccgagcgcctcggctacgccacc
gccgagagcgaggagcgctaccggctggcctccaccgcccacaccaagatcggcgtgatc
tcctcgatcgtcgagaagcacgcgggcgagccgaccctcgtcatcggcgcctacctcgac
cagctggaggaactcggcgccgaactgaacgcacccgtcgtgcagggttcgacgaagaac
agggagcgcgaagagctgttcgacgccttccgcaggggcgagatcgacaaactcgtggtg
tccaaggtcgccaacttctccatcgatcttcccgaggcgtccgtggccatccaggtctcc
ggcaccttcggctcccgccaggaggaggcccagcggctgggaaggctgctgcggccgaag
ggcgacggcaggcaggcgcatttctactccgtcgtcgcgcgcgacacggtggacaccgag
tacgccgcccaccggcagcgtttccttgccgagcagggctacgcctaccgcatcgtcgat
gccgacgacctgctgcggcccctgtga
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