Sulfodiicoccus acidiphilus: HS1genome_0077
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Entry
HS1genome_0077 CDS
T05813
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
sacd
Sulfodiicoccus acidiphilus
Brite
KEGG Orthology (KO) [BR:
sacd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sacd03009
]
HS1genome_0077
Ribosome biogenesis [BR:
sacd03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
HS1genome_0077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
Fer4_RLI
AAA_21
Fer4
AAA_23
AAA_15
AAA
AAA_22
AAA_24
Fer4_10
Fer4_7
Fer4_2
AAA_14
AAA_29
AAA_19
AAA_16
Fer4_21
Rad17
AAA_30
nSTAND3
RsgA_GTPase
Fer4_6
Fer4_9
AAA_18
RNA_helicase
MobB
AAA_33
VapE-like_dom
TsaE
ORC-CDC6-like
NACHT
Fer4_4
Fer4_16
KAP_NTPase
RuvB_N
Fer4_3
AAA_13
DO-GTPase2
DUF6810
NB-ARC
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
BBD71688
UniProt:
A0A348B0I6
LinkDB
All DBs
Position
complement(72774..74576)
Genome browser
AA seq
600 aa
AA seq
DB search
MRVAVINYADCKPDKCRVECVNFCPVNRSGTKAIELVEAMKGKPVIYEETCIGCGICVKK
CPFDAISIVNLPDALEGEAIHRYGINGFKLFGLPTPKRGAITAIIGKNGTGKTTILKILS
GELVPNFGDPEVMPTQDMVLQRFRGKEIHSYFKELYNKELRVVHKVQYVEVVGRLLKGKV
SDLLRRIDERGKLDEIRTLLRMESMWEKESSTLSGGELQKLLVGAALLREADVYVFDEPS
SYLDINERLNLSRVLRQLLGDKYVLMVDHDLIVLDYVADLVNVMYGEPSIYGRVSKSYSV
RAGINHMLKGFLPSENVKMRDYEIRFYMKDLAEMEGVTGTSIKISWSGVQKSFLGFSLSA
PRGEVREGEVVGIVGPNGIGKTTFVKILVGELKADAGIVEPEKSRLAYKPQVISPFTERT
VREVMEDASKDSLSSSSWFYVEVVRRFGLHKLLDSSVSSLSGGELQKLMIAKTLAKEADV
YVFDEPSAYIDVEERYVMARAIKRVTRERRSATLIVEHDLAIHDYVADRIIVFSGKPGVS
GNVEEPVPLRHGLNKFLREFGITFRRDAETGRPRANKPMSYLDRLQKERNEYYAMELSGE
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
ttgagggtagctgtcataaattacgccgactgtaagccggacaagtgtagggtcgaatgt
gttaacttctgtccagtcaataggtccggcactaaagcgatagagctagtagaggccatg
aagggcaaacctgttatttacgaggagacctgcataggatgtggaatttgtgtgaagaag
tgtccctttgacgccatatctattgtgaacttgcccgatgctctagaaggagaagcgatc
cacaggtatggcatcaatggctttaagttattcggattaccgaccccaaagcgcggagcg
atcactgcaattataggtaagaacggcaccggcaagaccaccatattgaagattctgtcc
ggggagctcgttcccaacttcggggatccagaagtcatgcctacacaggacatggtgctt
cagcggtttcgggggaaggaaatacactcttacttcaaggaactctataataaggaactg
agagttgtccataaagtccagtatgttgaggtggtagggaggttactaaaggggaaggta
tcggatctactccgaagaattgacgagaggggaaagttggacgagatcaggactttattg
agaatggagtcgatgtgggagaaggagagttcgaccttgagcggtggagagctgcagaag
cttttggtgggggcagctctcctaagggaggccgacgtctacgtattcgacgaaccctcc
tcttacttagacataaacgaacgccttaacctctctcgagtacttagacagctcttaggg
gataagtacgtccttatggttgaccacgacctgatagtcttagactatgtggcagacctt
gtcaacgtgatgtatggagagccgtcgatttatggtagggtttccaagtcctactctgta
agagctggtataaaccacatgttaaagggcttccttccaagtgaaaatgtgaagatgaga
gattatgagataaggttctatatgaaggacctcgccgagatggagggggttaccggtaca
tctataaagatctcgtggtcaggtgtgcagaaatcgtttctcggcttctccctatcggca
ccacgaggagaagtgcgagaaggtgaggtggttgggatagtagggcccaacggtatagga
aagacgacgttcgtgaagatcttggtgggcgaacttaaggccgacgcagggatcgtggaa
cctgaaaaaagcaggctggcatataagccacaggtcatatcaccttttactgaaagaact
gttagggaggttatggaggatgccagcaaggattcgctttcctcctcgtcatggttttat
gttgaggtagtgaggaggttcggccttcataagctactagactcctcagtctcctcactt
agtggaggagaactccagaagctaatgatcgctaaaactctagctaaggaggccgacgtc
tacgtattcgacgaaccttcagcctacatcgacgttgaggagcgttacgtcatggccaga
gctataaagagggtaactcgagagaggcgatctgccaccttaatagtagaacacgacctt
gccatacacgactacgtggccgacaggatcatagtgttctctggaaagcctggagttagt
ggtaatgtggaggaacctgttcctctcagacacggccttaacaagttcctcagggagttc
gggataaccttcaggagggatgccgaaactggtagacctcgagccaataaaccaatgagc
tatttggacaggctgcagaaggagcgtaacgagtattatgccatggagttaagcggagaa
tga
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