Sulfodiicoccus acidiphilus: HS1genome_0088
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Entry
HS1genome_0088 CDS
T05813
Name
(GenBank) hypothetical protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
sacd
Sulfodiicoccus acidiphilus
Brite
KEGG Orthology (KO) [BR:
sacd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sacd03016
]
HS1genome_0088
Enzymes [BR:
sacd01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
HS1genome_0088
Transfer RNA biogenesis [BR:
sacd03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
HS1genome_0088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Sen15
Motif
Other DBs
NCBI-ProteinID:
BBD71699
UniProt:
A0A348B0J7
LinkDB
All DBs
Position
83107..83577
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AA seq
156 aa
AA seq
DB search
MSVEGETLTIITDPPGEGVKVNATDSFLLEVLCEGLIKGRKISAIWNERKLEVGELIERL
SIRDEKLWEKVTVCVDLRNRGRQVKSGPFNNSLLIKSGSSFNTLIYIVSQNEELKLGELM
SWAENQRRLSLETVLAVVDRSGDVTYYSFSSLHTLK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgtggagggcgaaactttaaccataatcactgatcctcctggtgagggggtgaag
gtcaatgctactgactctttcctgttagaggtgttatgtgaagggttaatcaagggaaga
aaaatttccgctatatggaacgaaagaaagttggaggtaggggaacttatcgagaggcta
tcgataagagacgagaagctctgggaaaaagttacagtttgtgtagacttaaggaataga
ggaagacaggtaaagagtggaccattcaataattcccttttaataaaatcaggaagcagc
ttcaataccctcatatatatcgtaagtcaaaacgaggaactcaaactaggagagttaatg
agttgggcggagaaccagagaaggttgagtttggaaactgttttggcagtagtggatagg
tcgggcgatgttacttattactccttctcgtctctccatacgttgaagtga
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