Sulfodiicoccus acidiphilus: HS1genome_0180
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Entry
HS1genome_0180 CDS
T05813
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
sacd
Sulfodiicoccus acidiphilus
Brite
KEGG Orthology (KO) [BR:
sacd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sacd03016
]
HS1genome_0180
Enzymes [BR:
sacd01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
HS1genome_0180
Transfer RNA biogenesis [BR:
sacd03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
HS1genome_0180
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
TSEN34_N
Motif
Other DBs
NCBI-ProteinID:
BBD71791
UniProt:
A0A348B0T9
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All DBs
Position
166025..166564
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AA seq
179 aa
AA seq
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MPCTGNLLGERVVVFDIDEAKQLYNKGYFGKPLGESKPREIKSPLELSLIESVYLMKKGE
LKVVRNRTPLSVEELIDLASTKVSRFNVLNFVYENLRDKGFIVRSGIKFGADYAIYTIGP
GVEHAPYLVVALDAASQISVNELMGFGRVSHSVKKRLILALVDEKAKWVRYITFKWERM
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
ttgccctgtactggaaatctattaggagagagggtagtagtttttgacatcgatgaagct
aagcaactgtacaataagggttacttcggcaagcctctaggcgaaagtaagcccagggaa
attaaatcaccattagagctatccttaatagagtccgtatatttaatgaagaaaggagag
ctaaaggtagtccgtaataggactcctctttcagtagaagaattaatcgacttggcctct
actaaggtctccagatttaacgttctaaacttcgtctacgagaacctcagagacaagggc
ttcatagtcagatcaggcatcaagttcggggcggattacgcaatatatactattggacca
ggagttgaacacgctccctatttggttgtagcccttgacgcggcctctcaaatctcggtg
aatgagctaatgggatttggtagggtttctcacagtgtgaaaaaaaggttaattctagca
cttgttgatgaaaaggcaaagtgggtcaggtacataacgtttaaatgggaaaggatgtag
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