Sulfodiicoccus acidiphilus: HS1genome_1049
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Entry
HS1genome_1049 CDS
T05813
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
sacd
Sulfodiicoccus acidiphilus
Pathway
sacd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sacd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HS1genome_1049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sacd03021
]
HS1genome_1049
Transcription machinery [BR:
sacd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HS1genome_1049
Prokaryotic type
Archaeal type
TFB
HS1genome_1049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
HTH_Mga
BRF2-like_C_cyclin_rpt
HTH_Tnp_ISL3
Sigma70_r4_2
Zn_ribbon_tTFIIB
DUF382
Motif
Other DBs
NCBI-ProteinID:
BBD72660
UniProt:
A0A348B3A8
LinkDB
All DBs
Position
996064..996975
Genome browser
AA seq
303 aa
AA seq
DB search
MTEVSSDGFKDPYQSCITGGPHRPIMDYARGEVKCSECGLVLDQSVVDQGPEWRNFNQEE
RNGRERVGRPNDPGSHDWGMSTGVGRSRNPRRDAKIKNLNHKIRVSAKDRKLVTLLSSLH
QEASKLDLPRHVRDTGAMVLRKLYSEGLAKRIEPEVLVVGALLYASRVNRIPKTVPEVLA
VANVDKRQLWDAMERISKMSKVGDSFKPHLKPAEYVPRIVAELKLPDHVITKASELAEKA
YENGITSGRGHLGLSAASVYVVSALLDVKKTQKEIAEAMKITEVTIRNRCRDIVNNFDIT
VML
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
ttgactgaagtctcttccgacggcttcaaggatccttatcagagctgtatcactggaggc
ccacataggccaataatggattatgcgcgtggcgaagtcaaatgctcagagtgtggatta
gttctagaccagagtgtagttgaccaaggtccagagtggaggaacttcaaccaagaggaa
aggaacggcagagaacgtgtaggtaggcccaacgaccctgggagtcacgattggggcatg
agcactggagtgggaaggagtagaaaccctagaagagacgctaagataaagaacctcaat
cataaaatcagggtctctgccaaagacaggaagttagtcaccctgctctcatctctccac
caagaggcttctaaattagacctacctcgacatgtgagagatactggcgctatggtattg
agaaaactttacagcgaaggtctagccaagagaatagagccagaggtactggtagttgga
gccctgctctacgcaagtagagtgaacaggatccccaagactgtacccgaggtactggcc
gtagccaacgtggacaagaggcaactctgggacgccatggaaaggataagtaagatgtct
aaagtgggtgattccttcaaacctcacctgaaaccggcagaatacgttccacggattgtg
gcagagctcaaattgccggatcacgttatcacgaaagcgtcagaactggcggaaaaggcc
tacgaaaatggcataacgagtggaagaggtcatctgggactgagcgcggcctcagtttac
gtggtgagtgcgctgctcgacgtcaagaaaacccagaaagagatcgcggaggcaatgaag
ataacggaggtgacgataaggaataggtgcagagatatcgtgaacaacttcgacataact
gtcatgttatga
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