Allosaccharopolyspora coralli: GIY23_01535
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Entry
GIY23_01535 CDS
T06288
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sace
Allosaccharopolyspora coralli
Brite
KEGG Orthology (KO) [BR:
sace00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sace03032
]
GIY23_01535 (topA)
03400 DNA repair and recombination proteins [BR:
sace03400
]
GIY23_01535 (topA)
Enzymes [BR:
sace01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GIY23_01535 (topA)
DNA replication proteins [BR:
sace03032
]
Prokaryotic type
DNA Topoisomerases
GIY23_01535 (topA)
DNA repair and recombination proteins [BR:
sace03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GIY23_01535 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QGK68413
UniProt:
A0A5Q3Q244
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All DBs
Position
327315..330224
Genome browser
AA seq
969 aa
AA seq
DB search
MAGSTRTKQNGTNGAGNARRLVIVESPAKARKIASFLGSNFVVESSRGHIRDLPRGAADV
PAKYKGQSWARLGVDVDNDFEPLYLVTADKKPTVTELKDALKDVDELYLATDGDREGEAI
AWHLMQTLKPKVPVRRMVFHEITESAIQAAAENPRDLDQDLVDAQETRRILDRLYGYEVS
PVLWKKVMPKLSAGRVQSVATRVVVQRERERISFVSAHYWDLSATLDAGAEADPRSFSAR
LVSVDGAKVATGRDFGPDGQLKSADVRVLTEADARQLADGLASASLSVSSVEEKPYTRKP
YAPFMTSTLQQEAGRKLKFSSDRTMRTAQRLYENGYITYMRTDSTTLSDAALNAARSQAR
ELYGDSFVTKSPRQYTRKVKNAQEAHEAIRPAGENFRTPGEVASELDTDGFKLYELIWQR
TIASQMADAKGTTLSVRITGTAEGGEQCTFAASGRTITFSGFLRAYVESVDSEAGGSADD
AESRLPQLVQDQAITATELSPDGHSTNPPARYTEPSLVKAMEEMGIGRPSTYASIISTVQ
DRGYVWRKGSALVPSWIAFAVVGLMEKHFGRLVDYDFTAALEDELDGIAEGRQQRTRWLA
GFYFGGDVGPDDSIGRAGGLKKLVGSGVEEIDAREINSIPMCTDEQGRTVYVRVGRYGPY
LERVLGTKEDGTPESQRANLPDDLPPDELDIDVAEKLFATPMEGRSLGTDPETEHEIVAK
EGRFGPYVTEILPEGDKSKPRTGSLFKSMSLDSMTLDDALKLLSLPRVVGDDPESGEQIT
AQNGRYGPYLKRGTDSRSLETEEQIFTVTVDEALKIYAQPKQRGRRAPAPPLREMGDEPD
TGNALVIKDGRFGPYVTDGETNASLRKGDDVESITLDRAVELIQERRAKAPAKKKAPAKK
KSTATKSTATKSTASKGSSSKGTASKSTATKSTASKSTASKSTSGRKTASTKKSTSSSSS
AKASSTKSS
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
gtggctgggtcgacacgaacgaagcagaacggcaccaacggtgccggaaacgctcggcga
ctggtgatcgtcgagtcgcccgcgaaggcgcgcaagatcgcgtccttcctcgggtccaac
ttcgtggtggagtcctcccgtggccacatccgcgacctgccccgcggcgccgccgacgtg
cccgcgaagtacaaggggcagtcctgggcgcggctcggcgtggacgtggacaacgacttc
gagccgctgtacctggtcaccgcggacaagaagccgacggtgaccgagctcaaggacgcg
ttgaaggacgtcgacgagctctacctcgccacggatggtgaccgcgagggcgaggcgatc
gcctggcacctgatgcagacgctgaagccgaaggtgccggtgcggcggatggtgttccac
gagatcaccgagtccgccatccaggccgccgccgagaacccgcgcgacctcgaccaggac
ctcgtggacgcgcaggagacccgtcgcatcctcgaccggctctacggctacgaggtcagc
ccggtgctgtggaagaaggtcatgccgaagctctcggcgggccgggtgcagtcggtggcc
acccgcgtggtggtccagcgcgagcgcgagcgcatcagcttcgtctccgcgcattactgg
gacctgtccgcgacgctcgacgcgggcgccgaggccgacccgcggtcgttctccgcgcgc
ttggtctccgtcgacggcgccaaggtcgcgacgggccgggacttcggccccgacggccag
ttgaagagcgccgacgtgcgggtgctgaccgaagccgacgcccggcagctcgccgacggc
ctcgcgagcgcctcgctgagcgtgtcgagcgtcgaggagaagccgtacacgcggaagccg
tacgcgccgttcatgacctcgacattgcagcaggaggccggccgcaagctgaagttctcg
tcggaccggacgatgcgcaccgcgcagcggctctacgagaacggctacatcacctacatg
cgtacggactccacgacgttgtccgacgccgcgttgaacgccgcgcgcagccaggcgcgt
gagctctacggcgactcgttcgtgacgaagtcgccgcgccagtacacgcgcaaggtgaag
aacgcccaggaggcgcacgaggcgatccggccggcgggggagaacttccgcaccccgggc
gaggtcgcctccgagctcgacacggacgggttcaagctctacgagctgatctggcagcgc
accatcgcctcgcagatggccgacgcgaagggcaccacgctctcggtgcggatcaccggc
accgccgagggcggcgagcagtgcacgttcgccgcctccggccgcacgatcaccttctcc
ggtttcctccgggcgtacgtggagtccgtcgactccgaggccggcggcagtgccgacgat
gccgagtcgcggctgccgcagttggtgcaggaccaggcgatcacggccacggagctgtcc
ccggacggacactcgacgaacccgcctgcccgctacaccgagccgagcctggtcaaggcg
atggaggagatgggcatcggacgcccgtcgacgtacgcctcgatcatcagcacggttcag
gaccgcggctacgtgtggcggaagggctcggcgctggtgccgtcgtggatcgccttcgcc
gtcgtcggtctcatggagaagcacttcggcaggctcgtcgactacgacttcacggccgcg
ttggaggacgaactcgacggcatcgccgaggggcgtcagcagcgcacccgctggctggcc
gggttctacttcggcggcgacgtgggtcccgacgactcgatcggccgggccggtggtctc
aagaagctcgtcggttccggcgtggaggagatcgacgcgcgtgagatcaactcgattccg
atgtgcaccgacgagcagggccggacggtctacgtccgggtcggccggtacggcccgtac
ctggagcgggtgctgggaaccaaggaggacggcacgccggagtcgcagcgcgcgaacctg
ccggacgacctcccgccggacgagctcgacatcgacgtcgccgagaagttgttcgccacg
ccgatggaggggcgcagtctcggcaccgacccggagaccgagcacgagatcgtggcgaag
gaggggcggttcggcccgtacgtcaccgagatcctgccggagggcgacaagagcaagccg
cgcaccgggtcgctgttcaagtcgatgtcgctggactcgatgacgctcgacgacgcgctg
aagctgctgtcgcttcctcgggtggtgggtgacgaccccgagtcgggtgagcagatcacc
gcgcagaacggccgctacggcccgtacctcaagcgcggcaccgactcgcggtcgctggag
accgaggaacagatcttcacggtcaccgtggacgaggcgttgaagatctatgcgcagccc
aaacagcgcggccggcgcgcgcccgcaccgccgctgcgcgagatgggtgacgagccggac
acgggcaacgcgttggtgatcaaggacggccgcttcggcccgtacgtgaccgacggggag
acgaacgcgtcgctgcgcaagggtgacgacgtcgagtcgatcacgttggaccgtgcggtc
gagctgatccaggaacgtcgggcgaaggctccggcgaagaagaaggctccggcgaagaag
aagagcacggccaccaagagcacagccaccaagagcacagcctcgaagggctcttcgtcg
aagggcacggcgtcgaagtccacagccaccaagagcactgcctcgaagtccacggcgtcg
aagagcacgtcgggacggaagacggcgagcacgaagaagagcacgtcgtcttcgtcctcg
gcgaaggcgagttcgacgaagtcgtcctga
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