Allosaccharopolyspora coralli: GIY23_04010
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Entry
GIY23_04010 CDS
T06288
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sace
Allosaccharopolyspora coralli
Brite
KEGG Orthology (KO) [BR:
sace00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sace03400
]
GIY23_04010 (sbcD)
DNA repair and recombination proteins [BR:
sace03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GIY23_04010 (sbcD)
Archaeal homologous recombinant proteins
GIY23_04010 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Aldolase
Motif
Other DBs
NCBI-ProteinID:
QGK68820
UniProt:
A0A5Q3Q4Q9
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Position
839831..841012
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AA seq
393 aa
AA seq
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MRVLHTSDWHVGRTFHGRDLLADQEQVLSGLADLVTTERVDVVVISGDLYDRAVPSGEAV
EMCVRVLARVREAGAQIVVTPGNHDSAARVGAFAEFAAAGGLHLRTRICGLHEPVLLDDA
HGPVAFYGIPYLEPDPARRALQSCGDVPGAGDVDARGHAAVLTEAMRRITTDLRARASQT
RSVVLAHAFVTGGEPTESERTIAVGGVEQVPGSVFDGAHYVALGHLHGPQRLDEHLRYSG
SPVAYSFSEARQRKSVWLVDLAESGLAGVERRELPVPRRLATVRATLDDLLAHEQYADLE
EAYLSATLTDEVRPLEAMRRLQQRFPHAVHLEWEPDAGRATSTLRYSEAVRGRDDHTLAR
GFVADCRGSEPTTSEQELLSEALRSADVAEAAG
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgctgcacacctccgactggcacgtcggccggacgttccacggtcgtgatctg
ctcgccgatcaggaacaggtgctgtccggattggcggacctggtcaccacggaacgcgtc
gacgtggtcgtgatctccggggacctctacgaccgcgccgttccttccggcgaggccgtc
gagatgtgcgtccgcgtgctcgcccgtgtgcgggaagcgggagcgcagatcgtggtgacc
ccgggaaaccacgactccgctgctcgtgtcggtgcgttcgccgagttcgcagcggcgggc
gggttgcacctgcgcacccggatctgtggtctgcacgagccggtgctgctcgacgacgcg
cacggccccgtcgccttctacggaatcccttacctggaaccggatcccgctcgtcgtgcc
ctgcagtcctgtggtgacgtgccaggcgcgggcgatgtcgacgctcgcggccacgcagcg
gtactgaccgaggcgatgcggcgcatcaccaccgatctccgcgctcgcgcatcgcaaacc
cgctccgtcgtcctcgcgcacgccttcgtgaccggaggcgagccgaccgagtcggaacgc
accatcgcggtcggcggtgtcgaacaggtgccgggttcggtgttcgacggcgcccactac
gtggcactcgggcacctgcacgggccacaacgcctcgacgagcacctgcgctattcgggc
agcccggtcgcgtactcgttctccgaggcacggcaacggaaatccgtgtggctggtcgac
ctcgccgagagcggactcgcgggcgtcgaacgccgggagctgccggtcccgcgacggctc
gcgaccgtgcgggccacgttggacgacctgctcgcccacgagcagtacgcggacctggag
gaggcctacctgtccgcgacgctgaccgacgaggtgcgtccgctcgaggcgatgcgtcgg
ttgcaacagcgattcccgcacgccgtgcatctcgagtgggagcccgacgccggtcgcgcg
acgtcgacgctgcgctactccgaggcggttcgcggacgtgacgaccacacgctcgcgcgc
ggtttcgtggccgactgtcggggctccgagccgaccacgtccgaacaggagctgctgtcg
gaggccctgcggtccgccgacgtcgcggaggccgctggatga
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