Allosaccharopolyspora coralli: GIY23_17215
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Entry
GIY23_17215 CDS
T06288
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
sace
Allosaccharopolyspora coralli
Pathway
sace02020
Two-component system
sace02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sace00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GIY23_17215
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GIY23_17215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sace03021
]
GIY23_17215
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sace02035
]
GIY23_17215
Transcription machinery [BR:
sace03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GIY23_17215
Bacterial motility proteins [BR:
sace02035
]
Flagellar system
Flagellar assembly proteins
Stator
GIY23_17215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
UPF0122
HTH_23
UPF0147
Motif
Other DBs
NCBI-ProteinID:
QGK71028
UniProt:
A0A5Q3Q914
LinkDB
All DBs
Position
complement(3695328..3696380)
Genome browser
AA seq
350 aa
AA seq
DB search
MTEPTPVPDDAGGGARAATARPGAHVRRGARTSTDGHRDSGDQARGDRGGQRTAGDRLRG
AQAADDQDAGSDTPSGQAGLASLAVEDGQREPDPRSADEVEAGIVALWQAFGSTREQELR
DRLVLHYAPLVKYVAGRVGTGLPAHVEISDLIQSGIFGLVDAIEKFEPERGLKFETYAMQ
RIRGAILDDLRAQDWVPRSVRSRARDVERALERLEAKLQRTATDCELADELEMNQEDLRD
LLAQLNMTSVVALDDLIGAGRGTASLAETLPDDRAEDPVAALVDRDSRRQLAEAVERLSD
RDRVVVTLYYFENLTLAEIGKVLGVTESRVCQLHTRAVLRLRTKLTEQAT
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacccacccccgtacctgacgacgccgggggcggcgcccgtgcggcgaccgcg
aggccgggcgcccacgtgcgtcgcggcgctcgtacctcgaccgacggccatcgggacagt
ggtgatcaggcgcgtggtgaccggggcggtcagcggaccgctggtgatcggctcaggggt
gcccaggccgctgacgatcaggacgcgggcagcgacacaccgagcggccaggcggggctc
gcgagcctcgccgtcgaggatggtcagcgggaaccggacccacgcagtgccgacgaggtc
gaggcggggatcgtcgcgctgtggcaggcgttcggcagcacgcgggagcaggagctacgc
gatcgactggtcctgcactacgcgccactggtcaagtacgtcgccggccgggtcgggacg
ggcctgcccgcgcacgtggagatctccgatctcatccagtcggggatcttcggcctggtg
gacgcgatcgagaagttcgagcccgaacggggtctgaagttcgagacgtacgcgatgcaa
cgaatccgtggcgcgatcctcgacgacctccgcgcgcaggactgggtgccgcgttcggtg
cgcagccgcgccagggacgtcgagcgggcgctggaacgactcgaggcgaagctgcagcgc
acggccaccgactgcgagctggccgacgaactcgagatgaaccaggaagacctgcgcgac
ctgctcgcgcagctcaacatgaccagtgtcgtcgccctggacgatctgatcggcgcgggc
cggggcaccgcgtcgctggccgagacactgcccgacgatcgggcggaggacccggtggcg
gcactggtcgaccgggacagcagacgacagctcgccgaagccgtggaacggctcagcgac
cgcgaccgcgtggtggtcacgctgtactacttcgagaacctgaccctcgccgagatcggc
aaggtcctcggggtgaccgagtcccgggtgtgtcagttgcacacccgggctgtgctgcgg
cttcggacgaaactcaccgaacaggcgacgtga
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integrated database retrieval system
