Saccharopolyspora sp. ASAGF58: FDZ84_00825
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Entry
FDZ84_00825 CDS
T06538
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sacg
Saccharopolyspora sp. ASAGF58
Pathway
sacg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sacg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FDZ84_00825 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sacg03019
]
FDZ84_00825 (recQ)
03400 DNA repair and recombination proteins [BR:
sacg03400
]
FDZ84_00825 (recQ)
Enzymes [BR:
sacg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FDZ84_00825 (recQ)
Messenger RNA biogenesis [BR:
sacg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FDZ84_00825 (recQ)
DNA repair and recombination proteins [BR:
sacg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FDZ84_00825 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QIZ33550
UniProt:
A0A6H1R090
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All DBs
Position
236765..238618
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AA seq
617 aa
AA seq
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MRAVASPDLEVTDAHQVLQRVFGYDSFRGSQQEIVDHVIGGGDALVLMPTGGGKSLCYQI
PSLVRPGVGVVVSPLIALMQDQVDALNELGVRAGFLNSTQNYEQRRQTEDTFVSGDLDLL
YLAPERLRLDSTLDLLDRGKVSVFAIDEAHCVAQWGHDFRPDYLALSVLHERWPSIPRIA
LTATATQATRKEIATRLELTGARHFVADFDRPNIQYRIVPKNDPKKQLLQLLRTEHAGEA
GIVYRLSRAEVERTAEFLVANGINALPYHAGLDKEVRAAHQARFLREDGLVMVATIAFGM
GIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWMAYGLQDVVQQRKLIELSEGE
DAHRRTLSRHLDAMLALCETVECRRTQLLAYFGQDAPGVCRNCDTCLAPPESWDGTVAAQ
KLLSTVVRLDRERNQKFGAGQIIDILRGKKTAKVEQFRHDSLSVFGVGVDLSDNEWRGVI
RQLLAQRLLSVEGDYGTLMLTGSSGEVLRRDDPRKVMLRTEPKRVAAPATKSKAPKQAAQ
DMPPEAEPVFQRLRAWRAATAREENKAPFIIFHDSTLRQIAASQPSTLDELAGISGVGEQ
KLAKYGQAVLDTLAAEE
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccgtggcttcccccgatcttgaggtgactgacgcccatcaggttctgcaaagg
gtgttcggctacgactccttccgcggctcccagcaggagatcgtggatcacgtcatcggc
ggtggcgatgctctcgtgctgatgcccaccggcggtggcaagtcgctgtgctaccagatc
ccgtcgctggtgcgccccggtgtgggcgtcgtcgtctcgccgctgatcgcgctgatgcag
gaccaggtcgacgcgctcaacgagctcggcgtgcgggccggtttcctcaactccacccag
aactacgagcagcgccggcagaccgaggacacgttcgtctccggcgacctcgacctgctc
tacctggcgcccgagcgcctgcggctggactcgacgctggatctgctcgaccgcggcaag
gtttcggtgttcgccatcgacgaagcccactgcgtcgcgcagtggggccacgacttccgc
cccgactacctggcgctttcggtgctgcacgagcgctggccgtcgatcccccgcatcgcg
ctgaccgccaccgccacccaggcgacccgcaaggagatcgccacccgcctggagctgacc
ggggcccggcacttcgtcgccgacttcgaccggccgaacatccagtaccggatcgtgccg
aagaacgacccgaagaagcagctgctgcaactgctgcgcaccgagcacgcaggcgaggcg
ggcatcgtctaccggctttcccgcgccgaggtggagcggaccgcggaattcctggtggcc
aacgggatcaacgcgctgccctaccatgcgggcctggacaaggaggtccgcgccgcccac
caggcccggttcctgcgcgaggacggcctggtcatggtcgccaccatcgccttcggcatg
ggcatcgacaagcccgacgtgcgcttcgtcgcgcacctcgacctgcccaagtcggtcgag
ggctactaccaggagaccggccgcgcgggccgcgacgggctgccctcgaccgcctggatg
gcctacggcctccaagacgtggtgcagcagcgcaagctgatcgagctctccgagggcgag
gacgcacatcgccgcacgttgtcgcggcacctggacgcgatgctggccctgtgcgagacc
gtcgaatgccgccgcacacagctgctcgcgtacttcggccaggacgctccaggggtctgc
cgcaactgcgacacgtgcctggctccgccggagtcgtgggacgggacggtcgcggcgcag
aagttgctgtcgaccgtggttcgcctggaccgcgaacgcaaccagaagttcggtgccggc
cagattatcgacatcctgcgtggcaagaagaccgccaaggtcgagcagttccggcacgat
tcgctgagcgtgttcggcgtcggcgtcgacctgagcgacaacgagtggcgcggcgtgatc
cgccagctactggcccagcgcctgctgtcggtggaaggcgactacggcacgctgatgctc
accggatccagcggcgaggtgctgcgccgggacgacccgcgcaaggtcatgttgcgcacc
gaacccaagcgcgtcgccgccccggccaccaagtccaaggcgcccaagcaggccgctcag
gacatgccgccggaggccgagccggtcttccagcggctgcgggcctggcgtgcggcaacc
gcccgtgaggagaacaaggcgcccttcatcatcttccacgactccacgctccggcagatc
gccgcgtcgcaaccgtccaccctggacgaactggccggtatcagcggtgtgggcgagcag
aagctcgccaagtacgggcaggccgtgctcgacaccctcgccgccgaggagtga
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