Saccharopolyspora sp. ASAGF58: FDZ84_05455
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Entry
FDZ84_05455 CDS
T06538
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sacg
Saccharopolyspora sp. ASAGF58
Pathway
sacg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sacg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FDZ84_05455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sacg03019
]
FDZ84_05455
03009 Ribosome biogenesis [BR:
sacg03009
]
FDZ84_05455
03036 Chromosome and associated proteins [BR:
sacg03036
]
FDZ84_05455
Enzymes [BR:
sacg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
FDZ84_05455
Messenger RNA biogenesis [BR:
sacg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FDZ84_05455
Ribosome biogenesis [BR:
sacg03009
]
Eukaryotic type
90S particles
RNase
FDZ84_05455
Prokaryotic type
rRNA processing factors
FDZ84_05455
Chromosome and associated proteins [BR:
sacg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
FDZ84_05455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QIZ34285
LinkDB
All DBs
Position
complement(1212839..1213588)
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AA seq
249 aa
AA seq
DB search
MGGKQSRTRKVDRAPLLAALGVELDAELLTLALTHRSYAYENGGLPPNERLEFLGDAVLG
LVITDHLYTEHPDLPEGQLAKLRASVVNMHALAGVARGLGEGGLGEYLLLGRGEELTGGR
DKASILADGLEAVLGAVYLAKGIGVARDVVHRLFQPLLAEAPQRGAGLDWKTSLQELTAS
TGLGVPEYRVEEQGPDHRKEFSAYVAVGGQTYGRGDGRTKKEAEQKAAEAAWRQLSEQQT
TEDAGTPSA
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
gtggggggaaagcagtcgcggacccgcaaggtcgatcgggctccgctgttggcggcgctc
ggcgtcgagctcgacgccgagctgctcacccttgccctcacccaccgctcgtacgcctac
gagaacggcggtctgccgccgaacgagcggctggagttcctcggggacgcggtgctcggc
ctggtgatcaccgatcacctgtacaccgagcacccggacctgcccgaggggcagctcgcg
aagctccgcgccagcgtggtcaacatgcatgcgctggccggcgtcgcccgcgggctcggt
gagggaggtctgggcgagtacctgctgctgggcaggggcgaggagctcacggggggccgg
gacaaggcgagcatcctcgcggacggtctggaagccgtgctcggcgcggtttacctggcg
aagggcatcggcgtcgcccgcgatgtggtccaccggctgttccagccgctgctggccgag
gcgccgcagcgcggtgccgggctggattggaagacgagcctgcaggagctgaccgcgtcg
accgggctcggcgtgcccgagtaccgggtcgaggagcaggggccggaccaccgcaaagag
ttcagcgcctacgtggcggtcggcggtcagacctacggtcgcggcgacggccgcaccaag
aaggaagccgagcagaaggccgccgaggcggcctggcggcagctctccgagcagcagacc
accgaagacgccgggacaccctccgcgtag
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