Saccharopolyspora sp. ASAGF58: FDZ84_05720
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Entry
FDZ84_05720 CDS
T06538
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sacg
Saccharopolyspora sp. ASAGF58
Brite
KEGG Orthology (KO) [BR:
sacg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sacg03032
]
FDZ84_05720
03036 Chromosome and associated proteins [BR:
sacg03036
]
FDZ84_05720
03400 DNA repair and recombination proteins [BR:
sacg03400
]
FDZ84_05720
DNA replication proteins [BR:
sacg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FDZ84_05720
Chromosome and associated proteins [BR:
sacg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FDZ84_05720
DNA repair and recombination proteins [BR:
sacg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FDZ84_05720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
QIZ34329
UniProt:
A0A6H1R461
LinkDB
All DBs
Position
complement(1264186..1264800)
Genome browser
AA seq
204 aa
AA seq
DB search
MNKAQLIEALAERLGDKKTASQAVESVVDIIVRNVNKGEKVNITGFGVFEKRARAARTAR
NPRTGESVKVKKTNVPAFRAGTQFKEVVGGQRKLPRVSAAKAATTRGATTKTAGVTRAAA
GTRAKAATTTRAAATKTATGAAAAKATATKAAPKRTATKATAAKATPAKSTAKRATTAKA
TTTAAKTTRPATKKATTTRKTTKK
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcccagcttatcgaggctctggcggaacgcctcggagacaagaagaccgcc
agccaggctgtggaaagcgttgtggacatcatcgttcgcaacgtcaacaaaggcgagaag
gtcaacatcaccggcttcggggttttcgagaagcgggcccgcgccgcacgcaccgctcgc
aacccgcgcaccggtgagagcgtgaaggtcaagaagaccaacgtgcccgccttccgcgcc
ggcacccagttcaaggaagtcgtgggcggacagcggaaactgccgcgcgtctccgctgcc
aaggcggccaccacccgtggtgccaccaccaagaccgcgggcgtcaccagggccgctgcc
ggtactcgcgccaaggctgccaccaccacccgggcggccgcgacgaagaccgcgaccggc
gccgccgcagcgaaggcgaccgccaccaaggcggccccgaagcggaccgccaccaaggcg
accgctgcgaaggcgaccccggcgaagtccaccgcgaagcgggcgacgacggccaaggcc
accacgaccgcggccaagacgacccgtccggctaccaagaaggcgacgacgacgcgcaag
accacgaagaagtga
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