KEGG   Saccharopolyspora sp. ASAGF58: FDZ84_05720
Entry
FDZ84_05720       CDS       T06538                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
sacg  Saccharopolyspora sp. ASAGF58
Brite
KEGG Orthology (KO) [BR:sacg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sacg03032]
    FDZ84_05720
   03036 Chromosome and associated proteins [BR:sacg03036]
    FDZ84_05720
   03400 DNA repair and recombination proteins [BR:sacg03400]
    FDZ84_05720
DNA replication proteins [BR:sacg03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    FDZ84_05720
Chromosome and associated proteins [BR:sacg03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    FDZ84_05720
DNA repair and recombination proteins [BR:sacg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      FDZ84_05720
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: QIZ34329
UniProt: A0A6H1R461
LinkDB
Position
complement(1264186..1264800)
AA seq 204 aa
MNKAQLIEALAERLGDKKTASQAVESVVDIIVRNVNKGEKVNITGFGVFEKRARAARTAR
NPRTGESVKVKKTNVPAFRAGTQFKEVVGGQRKLPRVSAAKAATTRGATTKTAGVTRAAA
GTRAKAATTTRAAATKTATGAAAAKATATKAAPKRTATKATAAKATPAKSTAKRATTAKA
TTTAAKTTRPATKKATTTRKTTKK
NT seq 615 nt   +upstreamnt  +downstreamnt
gtgaacaaggcccagcttatcgaggctctggcggaacgcctcggagacaagaagaccgcc
agccaggctgtggaaagcgttgtggacatcatcgttcgcaacgtcaacaaaggcgagaag
gtcaacatcaccggcttcggggttttcgagaagcgggcccgcgccgcacgcaccgctcgc
aacccgcgcaccggtgagagcgtgaaggtcaagaagaccaacgtgcccgccttccgcgcc
ggcacccagttcaaggaagtcgtgggcggacagcggaaactgccgcgcgtctccgctgcc
aaggcggccaccacccgtggtgccaccaccaagaccgcgggcgtcaccagggccgctgcc
ggtactcgcgccaaggctgccaccaccacccgggcggccgcgacgaagaccgcgaccggc
gccgccgcagcgaaggcgaccgccaccaaggcggccccgaagcggaccgccaccaaggcg
accgctgcgaaggcgaccccggcgaagtccaccgcgaagcgggcgacgacggccaaggcc
accacgaccgcggccaagacgacccgtccggctaccaagaaggcgacgacgacgcgcaag
accacgaagaagtga

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