Saccharopolyspora sp. ASAGF58: FDZ84_12365
Help
Entry
FDZ84_12365 CDS
T06538
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sacg
Saccharopolyspora sp. ASAGF58
Pathway
sacg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sacg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FDZ84_12365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sacg03400
]
FDZ84_12365
Enzymes [BR:
sacg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FDZ84_12365
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FDZ84_12365
DNA repair and recombination proteins [BR:
sacg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FDZ84_12365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
FANCI_HD1
Ribosomal_S13
Zn_ribbon_TFIIB
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QIZ35356
UniProt:
A0A6H1R4L5
LinkDB
All DBs
Position
2618374..2619225
Genome browser
AA seq
283 aa
AA seq
DB search
MPELPEVEALAQHLRDNAVGRTVARIDVASMSVLKTASPPWTELHGRAVTGAVRHGKYLD
LDCDGLHLVCHLARAGWLRWSDNLSPVPPKPGKGPIALRVHLGGAGFDLTEAGTQKKLAA
WVVASPAEVPGIAKLGPDALGLDAAGLAEVLAGRTERIKTLLTDQSVLAGIGNAYSDEIL
HAAKLSPFATAGKLDAATVERLHSSVQEILRDAVQRSLKQDAARLKAEKRSGMRVHGRAG
LPCPVCGDTVREVSFADRSMQYCPTCQTGGKPLADRRLSRLLK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaacttcccgaggtggaggcgttggcccagcacctccgcgacaacgccgtgggc
cgcaccgtggcgcgcatcgatgtggcgtcgatgagcgtgttgaagaccgccagcccgccg
tggacggagctgcacggtcgtgccgtcaccggtgcggtgcggcatggcaagtacctcgat
ctcgattgcgacgggctgcacctggtgtgccacctggcgcgggccggttggttgcgctgg
tcggacaacctgtcgccggtgccgccgaagcccggcaaggggccgatcgcgctgcgggtg
cacctgggcggtgcgggtttcgacctgaccgaggccggcacgcagaagaagctggcggcc
tgggtcgtcgcttcgcccgcggaggtgccggggatcgcgaagctagggccggatgcgctg
ggcctggacgcggccgggttggccgaggtcctggcggggcgcaccgagcggatcaagacg
ctgctcaccgaccagtccgtgctggccgggatcggtaacgcctactcggacgagatcctg
cacgccgcgaagctgtcgccgttcgcgacggcgggcaagctcgacgccgccacggtcgaa
cggctgcacagcagcgtgcaggagatcttgcgggatgccgtgcagcgttcgctgaagcag
gatgcggcgcggctgaaggccgagaagcggtcggggatgcgggtgcacgggcgcgcgggg
ttgccgtgcccggtgtgcggcgacacggtccgggaggtgtccttcgcggaccggtcgatg
cagtactgcccgacctgccagactggcggcaagccgttggcggaccgccggttgtcccga
ttgctgaagtag
DBGET
integrated database retrieval system
