Saccharopolyspora sp. ASAGF58: FDZ84_17085
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Entry
FDZ84_17085 CDS
T06538
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sacg
Saccharopolyspora sp. ASAGF58
Pathway
sacg03420
Nucleotide excision repair
sacg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sacg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FDZ84_17085
03430 Mismatch repair
FDZ84_17085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sacg03400
]
FDZ84_17085
Enzymes [BR:
sacg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FDZ84_17085
DNA repair and recombination proteins [BR:
sacg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FDZ84_17085
MMR (mismatch excision repair)
Other MMR factors
FDZ84_17085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QIZ36082
UniProt:
A0A6H1R6N4
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All DBs
Position
3583299..3586553
Genome browser
AA seq
1084 aa
AA seq
DB search
MTGTEISPHRIAQALGLHPPTPEQAAVIAAPAEPALVVAGAGAGKTETMAARVVWLVANQ
LVTPERILGLTFTRKAARQLADRVRARLRRLAGSGLLDEVDPSGQLRSAVLTEEPTVLTY
HAYAGRLVGEHGLRVPVEPGARLLSETASWQLAHNVVATWTQDIDTDKVPSTVTGYLLSL
AGELAEHLVSPDDLRTHAEKLCHAVENAPRAKGQRANLPQDLVKVVAAQRLRVALMPLVE
EYAQRKRREGAMDFADQMSRAALLAAEHPEVVDGERARYGAVLLDEYQDTGHAQRVLLRS
LFGRERPLPVTAVGDPAQAIYGWRGASAANLPRFTTDFPRIEEGRKAPAHRYGLLTSFRN
PAEVLHAANAVSGPLRETGLEVDELRARDGAEAGDIRLALSEHVRAERDWVADQVTAQWQ
ATLDETGRPPTAAVLVRRRADMTDIAAALRERGLPVEVVGLGGLLDEPEVRDLVSALRML
VDPLAGTAAMRLLTGSRWRLGAADIAALWDRARELGAQAFGTPETADPAAVVTAALPGEN
AEQAGLVDALDDPGDAQRYSGDGYRRIRRLGRELATLRRRLDQPLPELVADVERTLLLDI
ESMARPVGAGRIHLDAFADAVTAFATASPSATLPALLDYLEAAERAEDGLEPGEVEVADD
RVQVLTVHAAKGLEWQVVAVPHLVNDVFPGKRKSSSWLRSVTELPAELRGDAEDLPRLDV
DRLSGLDRKELTEALGIHDEEFEERRLAEERRLLYVAVTRSERTLLLSGHWWGENGDRPK
GPSGFLRQLAEVLRGSGTGDIDLWTPEPDEDATNPLADAMRCAEWPVDPLGPRRAAVAEG
AGLVRAAMSTVDDAEPEDDEDGWSRDVDVLLAERAAAAQRREQVRLPDHLSVSQLVELAG
DSDSLARRLRRPLPFPPNPMTRRGTAFHAWLEHRFTSTALLDFDELPGAADESAPVHEDL
AELQRAFLAGSWADRTPHRVEVPFETQVEGVVLRGRMDAVFADADGGWTVLDWKTGAVPG
GDQVPALSVQLAAYRLAWAELSGTPLSKVRAAFHYVRHDYTLRPADLLDADGLRKLITSV
PAAR
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
gtgactggaacggaaatcagtccacatcggatcgcgcaggcgctcgggctgcacccgccg
acccccgagcaggcagccgtgatcgccgcgcccgccgaaccggcgctggtcgtggcgggt
gcgggcgctgggaagacggagacgatggccgcccgcgtggtctggctggtcgccaaccag
ctggtgacgccggagcgcatcctcggcctgacgttcacccgcaaggccgcgcggcagctc
gccgaccgggtacgcgcccggctgcgccggctcgccgggtccgggctgctcgacgaggtc
gatcccagcgggcagctgcgttccgcggtgctcaccgaggagcccacggtgctgacctac
catgcctacgcggggcggctcgtcggcgagcacgggctgcgggtaccggtcgagccgggc
gcgcgactgctgagcgagacggcgtcctggcagctcgcgcacaacgtggtcgcgacctgg
acccaggacatcgacaccgacaaggttccgtccactgtgaccggttacctgctgtcgctg
gccggcgagctcgccgaacacctggtgagcccagacgacctgcgtacgcacgccgaaaag
ctctgccacgcggtcgagaacgcgccgcgggccaaggggcagcgcgcgaaccttccgcag
gacctggtgaaagtcgttgccgcgcaacgcttgcgggtcgcgctgatgccgctggtcgag
gagtacgcgcagcgcaagcggcgcgaaggcgcgatggacttcgccgaccagatgtcgcgg
gccgcgctgctggccgccgaacaccccgaagtcgtcgacggcgaacgcgcccggtacggc
gcggtgctgctggacgagtaccaggacaccggccacgcgcaacgggttctgctgcgctcg
ctgttcgggcgcgagcgtccgctgccggtcaccgcggtcggcgacccggcgcaggccatc
tacggctggcgcggcgcgagcgcggcgaacctcccgcgcttcaccaccgacttcccgcgc
atcgaggaaggccgaaaggctccggcgcaccggtacgggctgttgacgagcttccgcaac
ccggcggaagtcctgcacgccgccaacgcggtttcggggccgctgcgcgaaaccggcctg
gaagtcgacgagctgcgcgccagggacggcgccgaggccggcgatatccggctggcgctg
agcgaacacgtgcgggccgaacgcgactgggtcgccgaccaggtcaccgcgcagtggcag
gcgacgctggacgagacgggacggccgccgaccgcggcggtgctggtgcgccgccgcgcc
gacatgaccgacatcgcggcggcgctgcgggaacgcggtctgccggtcgaggtcgtcggg
ctcggcgggctgctcgacgagcccgaggtgcgcgacctggtcagcgcactgcggatgctg
gtggacccgctcgccgggacggcagcgatgcggctgctcaccggctcgcgctggcgcctc
ggggcggccgacatcgcggcgctgtgggatcgcgcgcgggagctcggcgcgcaggccttc
gggacaccggagaccgccgatcccgctgctgtggtcaccgcggcgctgccgggcgagaac
gcggagcaggccgggctggtggacgcgcttgacgatcccggcgatgcgcagcgctattcc
ggcgacggctaccggcgcatccgacgcctgggacgcgagctcgccaccttgcggcgccgt
ctcgaccagccgctgccggagctcgtcgcggacgtcgagcggacgttgctgctggacatc
gagagcatggcgcggccggtcggcgcggggcggatacacctcgacgcgttcgccgacgcg
gtcaccgccttcgccaccgccagcccgtcggccacgctgcccgcgctgctggactacctg
gaagcggccgaacgcgccgaagacggcctggaaccaggcgaggtcgaggtcgccgatgac
cgtgtccaagtgctcaccgtgcacgcggccaagggcctggagtggcaggtcgtcgccgtg
ccgcacctcgtcaacgacgtcttccccggcaagcggaagtcctcgtcgtggctgcgctcg
gtcaccgaactgcccgccgaactgcgcggcgacgccgaagacctgccccggctcgacgtc
gaccggctgtccgggcttgaccgcaaggaactcaccgaggcgctcgggatccacgacgag
gagttcgaggagcgccggctcgccgaggagcggcggctgctctacgtcgcggtgacgcgc
tcggagcggacgttgctgctgtccgggcactggtggggcgagaacggcgaccggcccaag
gggccgtcgggcttcctgcggcagctggccgaggtgctccgcgggtccgggaccggggac
atcgacctgtggacgccggaacccgacgaagacgcgacgaacccgctcgccgacgccatg
cggtgcgcggagtggccggtggacccgctgggtccgcgccgcgcggcggtggccgaaggc
gcggggctcgtgcgggccgcgatgtccactgtggatgatgcggagccggaggacgacgag
gacgggtggtcgcgggacgtcgacgtgctgctggccgagcgcgcggcggcggcgcagcgg
cgggagcaggtgcggctgccggaccacctgtcggtgagccaactcgtcgaactcgccggt
gattccgacagcctcgcccggcggctgcgccgaccgctgccgttcccgccgaacccgatg
acccgccgtggcaccgcgttccacgcctggctggagcaccggttcacctcgaccgcgctg
ctggacttcgacgaactgcccggcgcagccgacgaatccgcgccggtgcacgaggacctg
gccgagctgcagcgggcgttcctcgccggatcctgggccgaccgcacgccccaccgcgtc
gaggtgccgttcgagacacaggtcgagggcgtggtgctgcgcggccggatggacgcggtg
ttcgccgacgccgacggaggctggacggtcctcgactggaagaccggcgcggtgccggga
ggcgaccaggtcccggcgctgtcggtgcagctcgccgcgtaccggctggcctgggcggaa
ctgtccggaacgccgctgtcgaaggtccgcgcggcgttccactacgtccgccacgactac
acgctccgcccggccgacctcctcgacgccgacggcctccggaagctcatcacctcggtc
cccgccgcgcggtaa
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