Saccharopolyspora sp. ASAGF58: FDZ84_21285
Help
Entry
FDZ84_21285 CDS
T06538
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
sacg
Saccharopolyspora sp. ASAGF58
Brite
KEGG Orthology (KO) [BR:
sacg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sacg03021
]
FDZ84_21285
Transcription machinery [BR:
sacg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FDZ84_21285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QIZ36720
UniProt:
A0A6H1R9C4
LinkDB
All DBs
Position
complement(4440946..4442043)
Genome browser
AA seq
365 aa
AA seq
DB search
MDSTGEDVDAGLVQPSVRVLHTAQRRAGVIRARQASPSGRELMTVPQTTKPDVAVAEDLD
TQGPSADLVRVYLNGIGRTALLTAQEEVDLAKRIEAGVFAKHLLETSKNLSPERRSDLGA
VVRDGRRAKNHLMEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGFKF
STYATWWIRQAITRGMADQSRTIRLPVHLVEQVNKLARIKRDLHQKLGREATDEELSEEA
GIPVEKILDLMDHSRDPVSLDMPVGAEEDAPLGDFIEDSESADAENAVISGFLQDDLRRV
LATLEEREQAVIRMRYGLDDGQPRTLDQIGKAFGLSRERVRQIEREVMAKLRQGDRADRL
RAYAS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atcgacagcaccggagaagacgtcgacgcggggctcgtacaaccgagcgtacgcgtcctt
cacaccgcgcaacggcgcgcaggtgtgattcgcgcccgccaagccagcccgtcagggagg
gagctcatgaccgtcccgcagaccaccaagccagacgtcgccgtcgccgaagacctggac
acccagggcccatcggccgacttggtgcgcgtctacctcaacggcatcgggcgcaccgcg
ctgctcaccgcacaggaagaggtcgacctcgccaagcggatcgaggccggggtcttcgcc
aagcacctgctcgagaccagcaagaacctctcccctgagcggcgctccgacctcggcgcc
gtggtccgcgacggccgccgggcgaagaaccacctcatggaggcgaacctccgcctggtc
gtgagcctggccaagcgctacaccggccgcggcatgccactgctggacctcatccaggag
ggcaacctcggcctcatccgcgcggtggagaagttcgactacaccaagggcttcaagttc
tccacgtacgcgacctggtggatccggcaggccatcacccgcggcatggccgaccagagc
cgcaccattcggctgcccgtccacctggtcgagcaggtcaacaagctggcccggatcaag
cgcgacctgcaccagaagctcggccgcgaagccacggacgaggagctctccgaagaagcc
ggcatcccggtggagaagatcctcgacctgatggaccactcgcgcgacccggtcagcctg
gacatgccggtcggggccgaggaggacgcgccgctcggcgacttcatcgaggactccgaa
tccgccgatgccgagaacgcggtgatctccgggttcctgcaggacgacctgcgtcgcgtg
ctggccacgctggaagagcgcgagcaggcggtgatccggatgcgctacggcctcgacgac
ggccagccgcgcaccctggaccagatcggcaaggcgttcgggctgtcccgcgagcgggtc
cggcagatcgagcgggaagtcatggccaagctgcgccagggcgaccgcgccgaccggttg
cgcgcgtacgcgagctga
DBGET
integrated database retrieval system
