Saccharopolyspora sp. ASAGF58: FDZ84_28425
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Entry
FDZ84_28425 CDS
T06538
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sacg
Saccharopolyspora sp. ASAGF58
Pathway
sacg03030
DNA replication
sacg03430
Mismatch repair
sacg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sacg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FDZ84_28425
03430 Mismatch repair
FDZ84_28425
03440 Homologous recombination
FDZ84_28425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sacg03032
]
FDZ84_28425
03400 DNA repair and recombination proteins [BR:
sacg03400
]
FDZ84_28425
Enzymes [BR:
sacg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FDZ84_28425
DNA replication proteins [BR:
sacg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FDZ84_28425
DNA repair and recombination proteins [BR:
sacg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FDZ84_28425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Optomotor-blind
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QIZ37787
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All DBs
Position
6072118..6072804
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AA seq
228 aa
AA seq
DB search
MGVTRALTNRYRRTTPWSCDRNQAWRAARFAVVDIETTGLDLAHDEIVSVGVSVVDRGRV
TDETVYRVVKPRCAISSSAMKVHALTDDEVAGAPGILEALAELRAVAAGSVLVAHAAWVE
RAFLNRALRSCGERVPDDLVDTAALARYAGLWPQGGDEPSLEVLSRALGLPVHTPHHALG
DAVTTAQLLLVLATRIESEAKPLMAGDLLDISRIWGLSARSGRAWRLR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcacgcgtgcgttgaccaataggtaccgccgcacaaccccttggtcctgcgac
cggaaccaggcttggcgagcagctcggttcgcggtggtcgacatcgagacgactggcctg
gacctggcgcacgacgagatcgtttcggtgggcgtctcggtggtcgaccgaggcagggtg
accgatgagacggtgtaccgggtcgtcaaaccccggtgcgctatttcgtcttccgcgatg
aaggtccatgcgctgaccgacgacgaggtggccggtgcccctgggatcttggaggctttg
gccgagctgcgtgccgtcgcggcaggttccgtgctcgttgcgcatgccgcgtgggttgag
cgcgccttcctcaaccgggccctccggtcctgcggcgagcgcgtgcctgacgacctggtg
gacacggccgcgttggcgcggtacgcggggctctggccgcagggcggcgatgaaccatcg
cttgaagtgctttcgcgtgcgctcgggctcccggtgcacaccccgcaccacgcgcttggg
gatgccgtgaccactgcgcagttgttgctcgtgcttgccacccgcatagagagcgaggcc
aagcctctcatggccggcgatctccttgacatcagccgaatttggggcctgagtgcgagg
agtggacgcgcgtggcgacttcgttga
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