Shewanella acanthi: K0H61_00020
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Entry
K0H61_00020 CDS
T09152
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sach
Shewanella acanthi
Brite
KEGG Orthology (KO) [BR:
sach00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sach03032
]
K0H61_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
sach03400
]
K0H61_00020 (gyrB)
Enzymes [BR:
sach01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K0H61_00020 (gyrB)
DNA replication proteins [BR:
sach03032
]
Prokaryotic type
DNA Topoisomerases
K0H61_00020 (gyrB)
DNA repair and recombination proteins [BR:
sach03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K0H61_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QYJ78890
LinkDB
All DBs
Position
3770..6187
Genome browser
AA seq
805 aa
AA seq
DB search
MSENSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCTDI
TITIHVDGSVSVRDDGRGIPVAIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSKKLQLTIRREGQVHEQFYTHGVPDAPIKVIGDATKTGTEIRFWPSEETFSDV
EFHFEILAKRVRELSFLNSGVGIRLVDERDNKNEFFKYEGGISAFVDYLNRNKTPVNKDV
FHFMQERDDGITVEVAMQWNDGYQENIFCFTNNIPQRDGGTHLAGFRSALTRNLNNYMEN
EGYNKKGKTNATGDDAREGLTAVISVKVPDPKFSSQTKDKLVSSEVKAAVEQTMGEKLND
YLLENPADAKLIVGKIVDAARAREAARKAREMTRRKGALDLGGLPGKLADCQEKDPGLSE
IYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYNPDKTRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYVYIAQPPLFKVKK
GKQEQYLKDEAALTQYLTTQALDGTSIYPSQGAPGMSGEPLERLVTQYREVEAIVARLEQ
RYPTHITNRMLYHPMISNEMLADEGKMKEWIDAFIHELVELESSGVLYSGEPVLDPERKV
YLPKITIRKHGIDTHYLFSYDFFQSTDYQRIGKLGAALEGLIEVGGYVQRGDRVKEVGSF
IEALDWTISEAKRGLYIQRYKGLGEMNPEQLWETTMDPESRRMLQVTIDDAVGADQLFTC
LMGDQVEPRRDFIEANALNVANLDV
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaatagttacgattcttcgagtattaaggtcctaaagggccttgatgcagtg
cgtaagagacctgggatgtatatcggtgacaccgacgacggtacgggtctacatcatatg
gtgttcgaagttgtcgataactctatcgatgaagccttagccggccattgtactgatatc
actattaccatccatgtggatggatctgtctctgtaagggacgatggtcgcggtattcct
gttgcgattcaccctgaggaaggcgtttctgccgccgaggtgatcatgacggtattgcac
gccggtggtaagttcgacgataactcctataaagtgtcaggtggtctacatggcgtgggt
gtatcggttgtaaacgccctgtctaaaaagctgcaattaaccattcgccgtgaaggccaa
gttcacgaacagttctatacccatggtgtgccagatgcacctatcaaagtgattggtgat
gcgactaagacgggtaccgaaatccgtttctggccaagtgaagagactttcagcgacgtt
gagtttcacttcgaaattctggcaaaacgcgtccgtgaattgtcattcttaaactcaggc
gttggtattcgcctcgttgacgaacgtgacaataagaatgaattctttaaatacgaaggc
ggtatcagcgcattcgtagattatttaaaccgcaataaaacgccggtaaacaaagacgta
ttccactttatgcaagagcgcgatgacggtattaccgttgaagtggccatgcagtggaac
gacggttaccaagaaaatatcttctgttttaccaacaacattccacagcgtgacggtggt
actcacttagccggtttccgtagtgcgctgacgcgtaacctcaacaactacatggaaaac
gaaggctataacaagaaaggcaaaaccaacgcgactggcgatgatgcccgcgaaggttta
actgcagttatttcagttaaagtgccagatcctaagttcagctcgcaaaccaaagacaag
ttagtctctagcgaagtgaaagccgcggttgaacaaaccatgggtgagaagctgaacgac
tatctattggaaaacccagccgatgctaagttaatcgtcggtaagattgtcgatgcggct
cgtgcccgtgaagcggcgcgtaaagcccgcgaaatgacccgccgtaaaggtgctctcgat
ttaggtggtttaccaggtaagctggccgattgccaagagaaagaccctggtctttcagaa
atctacatagtggaaggggactctgctggcggtagcgctaagcagggacgtaatcgtaag
aaccaagcgattctgccacttaagggtaaaatcttaaacgttgagaaggcacgttttgat
aaaatgctttcttctcaagaggttgcaacactgatcactgcgcttggctgtggcattggt
cgtgatgaatacaacccagataagacccgttaccacaacatcatcatcatgacggatgct
gacgtcgacggctcgcacattcgtaccttgctgttgaccttcttcttccgtcaaatgcct
gaactgattgaacgtggttatgtatatattgctcagccgcctttatttaaagtgaagaaa
ggtaagcaagaacaatacctgaaagacgaagcggcattaacgcagtatctcaccactcaa
gcattggatggtacaagcatttatccttctcaaggcgcaccaggtatgtccggtgagcca
ttggaacgtttagtgacgcaatatcgcgaagtggaagcgattgttgctcgtttagagcaa
cgctatccaacgcatattaccaatcgtatgctttaccacccaatgatcagtaatgagatg
ttggctgatgaaggtaagatgaaagaatggattgatgcctttattcatgagttagttgaa
ttagagagcagcggtgtactgtactcgggcgagcccgtattggatcctgagcgtaaagtg
tacctgccgaagattacgattcgtaaacacggtatcgatactcactacttgtttagctac
gacttcttccaatcaactgactaccaacgcattggtaagttaggtgctgcccttgaaggc
ctaattgaagtcggtggttatgttcaacgtggcgaccgcgtgaaggaagtgggtagcttc
atcgaagccttagattggactatctcagaagcgaaacgtggtctctatatccaacgttat
aaaggtttgggtgagatgaaccctgagcaattgtgggaaaccacaatggatccagagtct
cgtcgcatgctgcaagtcaccattgatgatgctgtgggtgctgaccaattgtttacctgt
ttgatgggtgaccaagttgaaccgcgccgtgactttatcgaggcaaacgcgcttaacgtg
gcgaacttagacgtataa
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