Shewanella acanthi: K0H61_00985
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Entry
K0H61_00985 CDS
T09152
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
sach
Shewanella acanthi
Brite
KEGG Orthology (KO) [BR:
sach00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sach03000
]
K0H61_00985
Transcription factors [BR:
sach03000
]
Prokaryotic type
Helix-turn-helix
Other families
K0H61_00985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
HTH_8
HTH_30
AAA_5
AAA_2
Mg_chelatase
AAA_3
HTH_1
nSTAND6
PAS
PAS_8
HTH_22
HTH_50
PAS_9
HTH_20
AAA_7
DUF2089
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
QYJ79058
LinkDB
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Position
202834..204666
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AA seq
610 aa
AA seq
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MTVEPHLKSSQAWLTESWQRSISAGLSEFSPAEELRLNGPDLKSKHEKYQQLIDLVQSHA
VPLFNQLMAHSNSRLLLADAEGYVLKHWGVSRYSSKLADVALDIGVNWLEKYRGTNAIGT
ALTSKRAIAVIGDQHFIRQNRFMSCTACPIFSHEGEMLGVLDISSEQHRHSPLTLMLVSS
LVQQVEIALLCQLPDSHYRIELAAQPSLLNSGWQGIVIADSDGRIVGCNPMAKQLLSQAK
LGDSIEQHLGGSWARLGGFHRDLALHLQTQAIGPMPIKKMATAVDKSQPQLGVRFRDPLL
ERAWQQANKVLTRQIPLLVLGETGVGKEQFVKKLHAQSTRRAQPLVAVNCAALPAELVES
ELFGYQAGAFTGAHRSGFIGKIRQAHGGFLFLDEIGEMPLAAQSRLLRVLQEREVVPVGS
NQSFKVDIQIIAATHMDLESLVAQGLFRQDLYYRLNGLQVRLPALRERQDIERIIHKLHR
KHRSCAQTMCVQLLDLLLHYDWPGNLRELDNLMQVACLMAEGEEVLDLMHLPDYLANKLA
KCAAKPTVGINQHVITGSCLQKNESLHSAINQNVLQVFSACEGNVSQCAKRLGISRNALY
RRLKQLGIKD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgacggtagaaccgcatttgaaaagctcacaggcttggttaacggaatcttggcagcgt
agtattagcgcagggttgtcggagttcagtccggcagaagagctcaggctaaatggccca
gatctcaaatctaaacatgagaaatatcaacagctcatcgatttagtgcaatcccatgca
gtgccactgtttaaccagttaatggcccactccaacagccgattattgctagcggatgcc
gaaggctatgttcttaagcactggggagtgagtcgttattccagcaaacttgccgatgtc
gccctcgatattggggttaactggcttgaaaaataccgaggcaccaatgcaatcggcact
gcgctgacttcaaagcgggcaatcgccgttatcggggaccaacatttcatccgccaaaac
cgctttatgagttgtactgcctgtccaatattttcgcatgagggcgaaatgcttggagtg
cttgatattagtagcgagcagcatcgtcattcgccgctgaccttaatgttagtgtcgagc
ctagttcagcaggtagagatagcactgctgtgtcaactaccagatagtcattatcgaatt
gaacttgcagcacaaccgagtcttttaaattccggttggcaaggcattgtgattgccgat
agtgatgggcggattgttggttgtaatccgatggcaaaacaactgcttagtcaggctaag
ctgggtgatagtattgagcaacatttagggggtagttgggctagattgggcggatttcat
cgagatttggcgcttcatttgcagactcaagctattggaccaatgcctatcaaaaaaatg
gcaactgcagttgataaatcccagcctcaattgggggtgagatttcgtgaccctttactt
gagcgcgcctggcagcaagctaataaggttctcactaggcaaattcctcttcttgtcttg
ggggagactggggttggtaaagagcaatttgtgaaaaagcttcatgctcaaagtactcgc
cgtgctcagccgcttgtggctgtgaactgtgcagcgctacctgctgagttggttgaatct
gagttatttggctatcaagctggcgcctttactggcgcccatcgcagcggttttatcggt
aagattcgccaagctcatgggggctttttgttcctcgatgagattggtgaaatgcccctt
gcggcgcagagccgcttactgcgggttttacaggagcgtgaagtggtgcctgtcggcagt
aatcaaagttttaaggtcgatatacaaattattgctgcgacccatatggatttagaatca
ttagtagctcaagggttgttccgtcaagatttgtactaccgtctcaatgggttgcaggtg
agattacctgcacttcgagagcgacaggatatagaacgcattatccataagctgcaccgt
aagcatcgtagctgtgcgcaaaccatgtgtgtccaactactcgatctgctgttgcactac
gattggccgggtaacctacgtgagttagataacctgatgcaagttgcttgtttaatggcg
gagggggaggaggtattagatctgatgcatttacccgactatttggccaacaagttagct
aagtgcgccgctaaaccaacggtaggtattaatcagcatgttataacagggagttgcctg
cagaaaaacgaatcgctacatagtgcgattaatcagaatgtattgcaggtatttagcgcg
tgcgaaggcaatgtcagccaatgtgctaagcgattaggtattagtcgtaacgccttatat
cgcaggttaaagcaacttggcataaaggattga
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