Shewanella acanthi: K0H61_04715
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Entry
K0H61_04715 CDS
T09152
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sach
Shewanella acanthi
Brite
KEGG Orthology (KO) [BR:
sach00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sach03016
]
K0H61_04715
Enzymes [BR:
sach01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
K0H61_04715
Transfer RNA biogenesis [BR:
sach03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K0H61_04715
Prokaryotic type
K0H61_04715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QYJ79741
LinkDB
All DBs
Position
1064165..1065253
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AA seq
362 aa
AA seq
DB search
MSELHYLYGKPAGTADLRTFNSDFIVKEILPFSPTGEGEHHLVHIRKDGLNTVQVAEMLA
KFAKVHPKEVTFAGQKDKNAVTEQWFGIRIPGKETPAWAELNSERLTILSSSRHSKKLRT
GALLGNRFILTLRNVSDMDDIINRIEKVSQVGVPNYFGEQRFGHDGKNLVMGRQMLAGKK
VKDRNKRSMYLSAVRSNLFNTVVSYRLANHGTKPLAGDCVMLAGSKSFFVTPEWDLVVLK
RLIEKDIQLSAPLWGRGKALPEGEAAEVETKAMAELTEDCYGLEHAGLDQERRPLLLEPQ
GLKYEKTEDGLVLDFILPAGSFATSLLRELVNYQDVTELRWLEKQNAQETQNIQEPQDEA
QS
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattacattacctatatggcaaacctgcgggcactgcggacttaagaaccttc
aatagcgattttatcgtgaaggaaattttgccctttagcccaactggcgaaggtgagcac
catttagtgcatatccgtaaagatggacttaacacagttcaagtggcggagatgctggca
aaatttgccaaggtgcatcctaaggaagtgacctttgcggggcaaaaggataaaaatgcc
gttactgagcagtggtttggtattcgcattccgggtaaagaaacccctgcatgggcggag
ttgaacagcgagcgcttaaccatactctccagtagccgccacagcaaaaagctacgtacg
ggggcactccttggtaaccgttttattctgacgctacgaaatgtcagcgatatggacgat
atcatcaatcgaatcgaaaaagtcagccaagtgggagtgccgaattattttggtgaacag
cgttttggccatgatggtaaaaacctggtaatgggacgccaaatgctggcgggtaagaag
gtaaaagatcgcaataagcgcagcatgtacctgtctgccgttcgctctaatctgttcaac
acagtcgtgtcctaccgtttggcgaatcatggcactaagccgctagcgggtgattgcgtg
atgcttgctggcagtaagagcttttttgtgacaccagagtgggatttggtggtattaaag
cgtttgattgaaaaagacatccaattatcagcgccgctctgggggcgtggtaaagcctta
ccagaaggtgaggcggcagaagtcgaaaccaaggcgatggccgagcttaccgaagactgc
tacggcctagagcatgcggggcttgatcaggaacgtcgtccattactcctcgaacctcaa
gggcttaagtacgaaaaaactgaagatggtttagtactcgattttattctccctgcgggc
agctttgcgacatctttgctgcgtgaattagtgaactatcaggatgtgactgagcttaga
tggcttgaaaagcaaaatgcccaggaaacacagaatatccaggagcctcaggatgaggct
cagtcatga
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