Shewanella acanthi: K0H61_04945
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Entry
K0H61_04945 CDS
T09152
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sach
Shewanella acanthi
Brite
KEGG Orthology (KO) [BR:
sach00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sach03400
]
K0H61_04945 (phrB)
Enzymes [BR:
sach01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
K0H61_04945 (phrB)
DNA repair and recombination proteins [BR:
sach03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
K0H61_04945 (phrB)
Prokaryotic type
K0H61_04945 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QYJ80542
LinkDB
All DBs
Position
1112309..1113781
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AA seq
490 aa
AA seq
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MWFRQDLRLNDNQALSAACDWVREQNSIHGSGGNDDLRQGAKLKAIFIATPKQWQRHDVA
PIQLDFIERHVNLLALELADLGIEFELIELDTFDEIPYFLSIYCQENGIARVFAGSEPEI
NEQRRDNACLKVGVPLLLTNEHCLLAPGSVLNLSGDMYRVFTPFSRKWREIACQRAIIPL
SKPSPVSTPIPDPSQFRFIRSNHCSSEHWAAGEVAAREMLTSFIEQKVQDYKQDRDYPAL
DGTSSISPYLAIGVLSPRQCIAALLERYPEALVDDTSQGRAWLNELVWREFYRHLLVAFP
ELSMSRNFNRLADNIRWRNDETEFRAWCEGKTGYPIVDAAMRQLNQIGWMHNRLRMVVAS
FLTKHLLIDWRWGERYFRQHLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPINQSEKFD
PDGSFIRHYLPELASWGIKRLHQPNLLPFHKNSELSLFDMPTESDYPVAIVEHSKARERA
LEVLGVLKKA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtggtttaggcaagatttgcgtttgaatgacaatcaagcgttaagcgctgcttgcgat
tgggttagggagcaaaacagcatacatggctcaggcggcaatgacgatttgaggcaagga
gcaaagcttaaagccatatttattgccacccctaagcagtggcagcgtcatgatgtcgcg
ccaattcagcttgattttattgagcgacacgtgaatttacttgcattggaactcgctgat
ctcggcattgagtttgagctgattgagcttgatacctttgatgaaatcccatatttttta
tcaatttactgtcaagaaaatggtattgcacgggtatttgctggcagtgagcctgagatt
aatgagcagcgccgagataatgcttgtttaaaagtgggggtgcctttactgctaaccaac
gaacattgtcttttagcccccggtagtgtgctcaacttaagtggcgatatgtatcgggtt
tttacgccttttagtcgtaaatggcgtgaaatagcctgtcaaagggcgattataccctta
tcaaaaccgtcgcccgtaagcacgccaattccagatccttcacaatttaggtttattcgc
tcaaatcattgctcgagtgaacattgggcggcgggcgaagttgcagcaagggaaatgtta
acaagttttattgagcaaaaagtgcaggattataagcaggatagggattatccggctcta
gatggcacaagttcaatttccccctatttagccattggcgtgttaagtcctaggcaatgc
attgcggcgttactcgagcgttatcccgaggcgttagtggatgatactagtcaaggaaga
gcttggttaaacgagctcgtttggcgggagttttatcgtcatctgctggtggcctttcct
gagctttctatgtctcgtaactttaaccgtcttgccgacaatattcgctggcgtaatgat
gaaacagaatttcgcgcttggtgcgaaggcaaaacaggatacccgattgtcgatgcggcg
atgaggcagttaaatcaaattggctggatgcacaatcgcttgcgtatggtggtggcgagc
ttcctaacaaagcatttgttgattgattggcgctggggggaacgttatttccgtcagcat
ttaatcgatggggatctcgcggcaaataatggtggttggcaatggtcagcaggttgtggt
tgtgatgcgcagccctattttagaatttttaatccaataaatcagagtgaaaaatttgac
cccgatggcagctttatccgccattacctacccgaattagcctcttggggcattaaacgt
ttacatcaacctaatcttttgccttttcacaaaaacagtgagctatcgctatttgatatg
ccaactgaatccgattatccagttgcgattgtggagcatagcaaagctagggagagggcg
ttagaggtgcttggggttttgaaaaaggcttag
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