Shewanella acanthi: K0H61_08295
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Entry
K0H61_08295 CDS
T09152
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sach
Shewanella acanthi
Pathway
sach03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sach00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K0H61_08295 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sach03400
]
K0H61_08295 (recD)
Enzymes [BR:
sach01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K0H61_08295 (recD)
DNA repair and recombination proteins [BR:
sach03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K0H61_08295 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
Viral_helicase1
UvrD_C_2
SH3_13
Helicase_RecD
AAA_11
AAA_16
AAA_22
UvrD-helicase
UvrD_C
AAA_28
SLFN-g3_helicase
DEAD
nSTAND3
SRP54
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QYJ80358
LinkDB
All DBs
Position
complement(1879488..1881569)
Genome browser
AA seq
693 aa
AA seq
DB search
MMRSTLGLNQHALTAANWQDLGSLQLRQPLTELLKHWEQQRIITALDRHFALEMAAIHLE
DGQDPLFILLCALLSQQLSAQHTCLVLEHIVPLNPMAETQSHCKITLGLSELQEKILTFD
AVGIAGSNKPLILDNGRLYLERYHHFETEVADKLRALSKQTKTIHPDDRAYIQRLLAGLF
PANPNQTIDWQKVATATALGRKLSVITGGPGTGKTTTVTKLLLLSQTMTTYTIRLVAPTG
KAAARLSESIKATKVRLADELKTRHIAEFTPENRTVLLEALAKVPEEASTLHRLLGVIPN
SPHFRHNKDNPLRLNLLIVDEASMVDLPMMHKLLSALPEEAGIILLGDQDQLASVEAGAV
LADICAGLKVTDANHGSFWQMRYSPEQVIHLSALTGFNLDQYQDIEPQIGDSLCMLTHSH
RFKGDAGIGILANAVNRSDLAGILQVWQQGLAELKWLEHSRTHGQTQSSFTELADNSGFS
ALLEQACQQYGSYLSQLQQSLLHNGPLPTPSEIIASFNQYRILCATRTGDYGVEGVNAHV
TKALAASKLINPLQEFYLGRPIIIQSNDYNLGLFNGDIGLILQDQEKPERLMAHFIKADG
SLLKVLPARLPSHETCYAMTVHKSQGSEFSRVALVLPPMPSPVQWQLLTKELVYTAITRA
KAHFTCLGTQEVFERASSQATQRASGLATRLWC
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgttcaacccttggccttaatcaacacgcgttaactgccgctaattggcaggat
ttaggatctttgcaactgagacagccgctgaccgaactgttaaaacattgggagcagcag
cgaattatcaccgccctagacaggcattttgccctcgaaatggcagccatccatcttgag
gatggtcaggatcccctgtttattttgctgtgcgcactcctcagtcagcagctttctgcc
cagcacacttgtttggtactcgagcatattgtgccgcttaatcccatggcagaaacccag
agccactgcaagatcaccctaggattgagtgagctgcaggagaaaatattaacctttgat
gccgttggcatagcgggcagcaacaagccactgatcctagataacggcagactgtacctt
gagcgttaccaccattttgagaccgaggtggccgataaactgcgtgcgttgtccaaacaa
accaaaaccattcaccccgatgacagagcctatattcaacgattgttggcaggactgttt
cccgccaatcccaaccaaaccattgattggcagaaggtcgcgaccgcaacagcccttggt
cgtaagctctccgttataacaggggggccaggcacgggcaaaactaccacagtgactaag
ctgctgttattgtcgcagacaatgaccacctacacgattcgcctcgtggcgccaacgggt
aaagccgcggcgcggctcagcgaatccattaaagccactaaggtgcgcttggccgatgag
ctgaagactcgccatatcgccgaattcacaccagaaaatagaaccgtgctgctagaagca
ctcgcaaaggtgcctgaggaagcctcgaccctgcaccgattgctgggcgtcatccccaac
tcgccacattttaggcacaacaaggacaatcccttaaggctcaatctgctgattgtggat
gaagcctcaatggttgatttacctatgatgcacaagctactcagcgccctaccagaggaa
gctggcattattctccttggggatcaggatcagcttgcatcggttgaagcaggcgcagtt
ctcgccgacatttgcgccggccttaaggtgacggatgccaaccatggcagtttttggcag
atgcgttatagccctgagcaggtcattcatttatccgccctaacaggctttaacttagat
caataccaggatatcgaaccgcagataggcgacagtctgtgtatgctgacccacagtcac
cgcttcaagggggatgcgggaattggcatactggcaaatgccgttaatcgctctgactta
gcaggaattttacaggtatggcagcaaggtcttgccgaactcaaatggcttgaacatagc
cgcacccatggccaaacccaatctagctttaccgagttagccgacaatagcggttttagc
gctttacttgaacaagcttgccaacagtacggtagctacctcagtcaattacaacagagc
cttttgcacaatggtcctctgcctacaccgagcgaaatcattgccagctttaatcaatac
aggatcctctgcgctacgcgcactggcgactacggcgttgaaggggtaaatgcccatgtg
acaaaggcgctggccgcgtcaaaactcatcaatcccttacaggaattttatttagggcgg
cccatcattatccagagtaacgactataacttgggcctctttaacggcgatatcggctta
attttacaggatcaagaaaaaccagagcgcttgatggcacactttattaaggcagatggt
agcttactaaaagtgcttcccgcacgattgcccagtcacgaaacctgttatgccatgaca
gtacacaagagtcagggaagtgaatttagccgcgttgccttagtattgccaccaatgcca
agtccagttcaatggcagctattaaccaaggagttagtgtataccgccatcacccgcgct
aaagcacatttcacctgtttgggcacccaggaggtatttgaacgtgcaagcagtcaggca
acccagagagcatcggggctcgccacgcgcctttggtgctag
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