Shewanella acanthi: K0H61_11080
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Entry
K0H61_11080 CDS
T09152
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sach
Shewanella acanthi
Brite
KEGG Orthology (KO) [BR:
sach00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sach03400
]
K0H61_11080
DNA repair and recombination proteins [BR:
sach03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K0H61_11080
Archaeal homologous recombinant proteins
K0H61_11080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QYJ77677
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All DBs
Position
complement(2532768..2535824)
Genome browser
AA seq
1018 aa
AA seq
DB search
MKPLTLSMSAFGPFATTQSIDFTALGSNPLFLINGPTGAGKTTILDGICFALYGKTTGNE
REGAQMRCDLADDALLTEVTFKFQLGSATYSIRRVPEQERAKKSGEGSTLQKSEAQLFRI
DANGEQTLIVANKVSEATAEIEALTGLDVEQFRQVMVLPQGKFRELLIADSKAREQIFSQ
LFQTHIYKRIEDTLKAKAADIRARVKDQRSRRDGILQTAELNSDEELVAELSHLETEFSI
AKNAKDMATASHQQAIKQHDGAQQLLAEFARLTGLEAEAQQLEEQKQLIEVQSQTLNVAR
QAQRVKPLLDNAIAREQEAHSADRLFVEAQNALSLAQNEQTKADYEAQQLVALEQTLKET
EQRVTSLSSLVPELNELMLLSKAVDDAKLQLDSTKAKGQGSKTALAELVQKRSEQELLLP
KLQMQSELLLSSQQALSQHNHMFEQFKQWQQIEAKVSASQAALTLAGEHGRILKDAHQQA
QHLAKSLQLRWFQGQAAILARELKTNEPCPVCGSSEHPNPAVAHEDLPTDAQLQHAQELE
ALSLDNLSKARADYKGLQKQLETQQQQASELSLSLGDFVQQTLESHLEKQQLLVTNAKAA
ESASKQLINLQQQLTSLQQQERALNERLELEREQYREHETQLERLSGQLAEKSQRIPEDY
RALDMLNQAISTNEQQLTKLKASIELIRNTQQLALQRTVAANAALKAAEQTREIALQQQT
KAQNALDTELNHVGFADRDNFLQAMLSDDRIQALSEDIEGYHRQFALNQSQLSQLKSQLS
GAVIPNIEELKTQLALLAEQLQLAEQAWNHLHARLTLLKQTHSQLKLVDQKSTSLEDEYA
VIGTLADVACGNTGNKISLQRFVLSVLLDDVLLAATHRLHLMSKGRYRLLRKEDRAKGNK
ASGLELEVEDAYTSKVRPVATLSGGESFMAALSMALGLSDVVQAYAGGIKLDTLFIDEGF
GSLDQDSLELAIRTLVDLQSAGRMIGVISHVTEMKEQIGSRIDILKNSHGSEIRLILP
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccttaacgctatcgatgtcagcctttggcccttttgcgacaacacaatcaatt
gactttaccgctcttggcagtaacccgctgtttctgattaacggcccaacgggtgcgggc
aagaccaccattcttgatggcatctgttttgcgctctacggcaaaaccacaggtaatgag
cgtgaaggtgctcagatgcgttgtgacctagcagatgatgcgctccttaccgaggtgaca
tttaagtttcagctaggtagcgcgacgtatagtatccgccgcgtacctgagcaagaaaga
gctaaaaaaagcggtgagggctcgacgctgcaaaagagcgaagcgcagttgtttcgaatc
gatgctaatggcgagcaaacactgattgttgccaataaagtctccgaggcaacggctgaa
atagaggcattaacggggctcgacgtcgagcaatttcgacaggtgatggtgctgcctcag
ggcaagtttcgtgaactgttaatcgcggattccaaagcccgtgagcagatttttagccag
ttatttcaaacgcatatttataagcgaatcgaagacactctaaaagccaaggcggccgat
attcgcgcgcgggtaaaagatcagcgctcacgtcgcgacggcattttacaaaccgctgag
cttaattcagacgaggaactagtcgctgagttgagccatctagagaccgagttttcaatt
gctaaaaatgctaaagacatggcaacagccagtcatcagcaggcaataaaacagcacgat
ggtgctcagcagcttttggctgagtttgcacgcttaacaggcttagaagccgaggcgcaa
caacttgaagagcagaagcagctgattgaggtgcagagtcaaacacttaatgttgctagg
caggcgcagcgcgtaaaaccgctgttagataatgcgattgcccgcgagcaagaggctcat
tcggctgaccgactctttgtcgaggcacaaaacgctttaagccttgcacaaaatgagcag
actaaagccgactacgaggcgcagcagttggtcgcccttgagcaaacgctaaaagaaact
gagcagcgcgttacttcattatcttctctcgtgcctgagctcaatgagttgatgctgcta
tccaaagctgtagatgatgccaagcttcaactcgatagtaccaaggccaaagggcagggc
agtaaaacggcattggcagagttagttcaaaaacgcagtgaacaagagctgctacttccc
aagcttcaaatgcaaagcgagcttttgctttcaagtcagcaggcgctatctcaacataac
catatgtttgaacaatttaagcagtggcaacagattgaggccaaagtcagcgcatcccaa
gctgcgttaactcttgcgggtgagcatggccgcatccttaaagatgcacatcaacaggcg
cagcatcttgcaaaatcattacagctccgctggtttcagggccaggcggcgatacttgct
cgggagcttaagaccaacgagccttgcccagtgtgtggtagtagcgagcatcctaatcct
gccgttgcccacgaggatttgccaacagatgcgcagttacaacatgcgcaggagctagaa
gctctctcgctcgataacctcagtaaagccagagcggactataaggggctgcagaaacag
ctagaaacccaacagcagcaagcgagcgagctttcgctgagcttaggcgattttgttcaa
caaacgctggagtcacacctcgaaaagcagcaattgttagtgactaatgcaaaggcggct
gaaagtgcaagtaagcaactgataaatttacagcagcaacttacttcgctacagcaacag
gagcgagcactcaatgaaaggcttgaacttgaacgtgagcagtaccgtgagcatgaaacc
caacttgagcgcttatcggggcagttagccgagaaatctcaaaggatccccgaagactat
cgtgccctcgatatgctcaatcaggcgattagcaccaatgagcaacagttaacaaagcta
aaagcgtcaatcgagctgattagaaacacccagcaattggcattgcaacgaaccgttgcc
gccaacgccgccttaaaggctgccgagcagactagggaaattgccctgcagcagcaaact
aaggcgcaaaacgcccttgatactgagcttaatcatgtcggttttgcagatagggacaat
tttcttcaagctatgctctccgatgatcggatacaggcgctgagtgaggacattgagggt
taccacagacaattcgcgcttaatcaatcacagttaagtcagctaaagtctcagctaagt
ggtgccgtaattccaaacattgaggagctcaaaacgcaattagctctgttggcggagcaa
ctgcaacttgccgagcaagcttggaatcacttacacgcaagattaaccctgctcaagcaa
acccactctcagcttaagctggtggaccaaaagtcaacttcccttgaagatgaatatgcc
gttattggcaccttggcggatgtggcttgcggtaatacggggaataaaatttccctgcag
cgttttgtgttgagtgtactgctcgatgatgtactcctcgctgcaacccacagattgcat
ctgatgagtaaagggcgttatcgattacttcgtaaggaagatagagcaaagggcaataaa
gcgtcaggccttgagcttgaggttgaagatgcctacacctctaaagtgcgcccagtggcg
acattaagtgggggagagagttttatggctgcgctgtcgatggcacttggattatcggat
gtcgtgcaagcctatgcgggcggaattaagctcgataccttatttattgacgaaggattt
ggcagtttagatcaggattcattggagctggcgattcgaaccttagttgatttgcaatct
gctggacggatgattggcgtcatttcccatgtaacggaaatgaaggaacagatcggatct
cgtatcgatattcttaaaaattcccatggcagcgaaatccggcttattttgccttag
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