Shewanella acanthi: K0H61_13470
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Entry
K0H61_13470 CDS
T09152
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
sach
Shewanella acanthi
Brite
KEGG Orthology (KO) [BR:
sach00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sach03009
]
K0H61_13470
Enzymes [BR:
sach01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
K0H61_13470
Ribosome biogenesis [BR:
sach03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
K0H61_13470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QYJ78112
LinkDB
All DBs
Position
complement(3133858..3134571)
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AA seq
237 aa
AA seq
DB search
MQSKRGRLDRFLATTLQIHRKSVRELLLAKRVLVDGVVAREMDMQIHEFSHIVFDSLILQ
ANTPEYWMLHKPVGVVSATKDDEHKTVIELLDCAARDELHIAGRLDLNSSGLLLLTNDSR
WSEALMAPTQKVDKVYRVTLANPLSEDYIAAFAEGMYFGFEDITTQPAKLKILAPHVAEV
TLREGKYHQIKRMFGRFRNPVVGLHRLSIGDIFLDNQLSPGESRPLTAKEVASISLC
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctaaacgtggtcgactcgaccgattcttagcaaccactttgcaaattcatcgt
aaatcggtgcgggagctattgctcgcaaaacgtgtattagttgatggcgttgtggcgagg
gaaatggatatgcaaatacatgaattctcgcatatcgttttcgattcattgatattgcag
gctaatacgccagagtattggatgctgcataaacccgttggggttgtgagtgccactaag
gatgatgaacataaaacggttattgagctcttagactgtgcagcgcgcgatgagctgcat
attgcaggacgattggatttaaattcttcaggcttattattgttgaccaatgacagccgc
tggtctgaagccctgatggcgcctacacaaaaggtggataaggtgtatcgggtcacccta
gccaatcccttgagtgaggactatatcgcggcatttgccgagggcatgtatttcggtttt
gaagatatcaccacccagcctgcaaaacttaagatcctcgccccccatgttgcagaggtc
accttaagagaaggtaaatatcatcaaatcaagcggatgtttggtcgttttcgtaatccc
gtcgtcggcttacatcgattatcaatcggtgatatttttttagataaccagctttcccct
ggcgaaagtcgacctcttacggctaaggaagttgcctcgatttcattgtgttag
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