Shewanella acanthi: K0H61_14060
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Entry
K0H61_14060 CDS
T09152
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
sach
Shewanella acanthi
Brite
KEGG Orthology (KO) [BR:
sach00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sach03009
]
K0H61_14060 (srmB)
Enzymes [BR:
sach01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K0H61_14060 (srmB)
Ribosome biogenesis [BR:
sach03009
]
Prokaryotic type
rRNA helicases
K0H61_14060 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AASDHPPT_N
PhoH
AAA_11
7TM_GPCR_Sra
Motif
Other DBs
NCBI-ProteinID:
QYJ78221
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All DBs
Position
3273962..3275221
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AA seq
419 aa
AA seq
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MQFEDFQLDPSLLVSLKAMGHISPTTIQQETLPHALEQRDILARAPTGTGKTASFLLPAL
QHLIDFPRRYSGQARVLILTPTRELASQIHRYASHLATGQGLDIAIITGGVPYAPQEEAL
KGNIDILVATPGRLMEYLDKGKFSAESVDVLIIDEADRMLDMGFSAVVKSIAIEAQGRKQ
NMLFSATLEGGGVIRFARELLNNPIEIDVDAPRKEKAKIHQWIHLADDKTHKFALLCHLL
QQEEVKRAIVFVKTRDIVSSLEGQLLKAGIPCAFMRGDMEQKKRFQALSRFTKGEVNVLL
ATDVAARGIDIDDITHVINFDMPRSADTYIHRIGRTGRAGAKGTAISLAEAHDMRIVGKI
ERYIEQPLKRRVIEELRPKHKEARVPTKKKAKVKAKEAAKKNNKKEAAKKAAKIAKKKQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttgaagatttccagcttgaccctagcttattagtgtcacttaaagccatgggg
catatttcgcccaccacaatccagcaagaaacacttccccacgccctagagcagcgggat
attctggcacgcgccccgacgggaacaggtaaaaccgccagtttcttattgcctgcgctg
cagcacttaatcgactttcctcgccgctattcgggtcaagctcgcgttctaatcctcacc
ccaacccgagagcttgcaagccaaattcaccgttatgccagtcacttagccacaggccaa
ggtctggacatcgcgattattaccggcggtgtgccatatgcaccgcaggaagaagcccta
aagggcaacatcgatatcctcgtcgctacccctggccggctgatggaatacttagacaaa
ggtaaattcagtgccgaatccgtcgatgtattaattatcgatgaagctgaccgcatgctg
gatatgggcttctctgcagtagtgaagtccatcgcgattgaagcccaaggccgtaaacag
aacatgctattctccgcgaccttagaaggcggtggcgtgatccgttttgcccgtgaactc
ctgaacaatccgattgaaatcgatgtcgatgcaccacgtaaagaaaaggccaaaatccac
caatggattcatttagccgacgataagactcacaagttcgctttgctttgccacttgcta
caacaggaagaagtgaagcgcgctatcgtgtttgtaaaaacacgggacatcgtttcaagc
cttgaaggtcaattgcttaaagctggaattccctgcgcctttatgcgcggtgacatggaa
cagaagaaacgcttccaagcactgagccgttttactaagggtgaagtgaatgtgttattg
gcgaccgatgttgcggcccgtggtatcgatatcgacgacatcactcatgtgattaacttc
gacatgccacgctcggccgacacatatattcaccgtatcggacgcacaggtcgtgcggga
gctaaagggactgcaatttccttagctgaagcccatgatatgcgcatcgtgggtaagatt
gagcgttatatcgagcaaccgctgaagcgtcgtgttatcgaagaactgcgtccaaagcat
aaagaagcccgagtgccgactaagaaaaaagccaaagtgaaggcaaaggaagcagcgaaa
aagaataacaagaaagaggcagcgaaaaaggcggctaaaattgccaaaaagaaacagtaa
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