Shewanella acanthi: K0H61_15210
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Entry
K0H61_15210 CDS
T09152
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
sach
Shewanella acanthi
Pathway
sach03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sach00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K0H61_15210 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sach03400
]
K0H61_15210 (uvrA)
DNA repair and recombination proteins [BR:
sach03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K0H61_15210 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K0H61_15210 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_23
AAA_21
AAA_25
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND3
Viral_helicase1
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
QYJ78429
LinkDB
All DBs
Position
3557205..3560057
Genome browser
AA seq
950 aa
AA seq
DB search
MDKIEIRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRC
PTHGQPLAAQTISQMVDKVLEMPEDSRLMLLAPVVNGRKGEHVKLLEGLSAQGYIRARID
GEVCDLSDPPTLDLHVKHTIEVVVDRFKVRSDIQQRLAESFETALELSGGIAVVASMDEG
ATEELVFSANFACPHCGYSMAELEPRIFSFNNPAGACPTCDGLGVQQFFDPERVITNPEL
SLAGGAIRGWDRRNFYYFQMLTSLAEHYKFDVEVPFEQLTDKVRKIVLYGSGNDSIAFKY
INDRGDVVVRNHPFEGILNNMDRRYRETESNSVREELAKFINTQACQSCGGSRLREEARN
VFIGDLNLPKLTMWSIGEALAYFEKLEFSGQRAQIAEKVLKEVRDRLGFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLIHLRDLGNT
VIVVEHDEDAIRIADHIVDIGPGAGVHGGEVICDGPLEKIVACDESVTGQYISGRRNIHI
STPRTPFDPKQVIELFGARGNNLRNVDLTVPVGLFTCVTGVSGSGKSTLINDTFFKIAHK
LLNGATVDEPAPYDKIVGMEQCDKVVDIDQSPIGRTPRSNPATYTGIFTPIREIFAGTQE
SRTRGYQVGRFSFNVKGGRCEACQGDGLIKVEMHFLPDVYVPCDACKGKRYNRETLEVRY
KGKNIHEVLQMTVEDAREFFDAVPAIARKLQTLMDVGLSYVRLGQSATTLSGGEAQRVKL
AKELSKRDTGKTLYILDEPTTGLHFADIQLLLDVLHRLKSHGNTIVVIEHNLDVIKTADW
IIDLGPEGGAGGGTILATGTPDEVAQHPTSHTARFLKPLLERDALLAAKK
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggataagattgaaatacgcggcgcacggacccacaatctcaaaaatatcaacctgact
atcccaagggataagttgattgttatcacagggttatcgggttcgggtaaatcctcctta
gcatttgataccttatatgccgaaggccaacgacgttacgtcgaatccctttccgcctat
gcgcgccaattcttaagcctgatggaaaagcccgatgtcgaccatatcgagggcttaagc
ccagcgatttccatcgagcagaaatcgacttcccataacccgcgttcaaccgtgggcacc
attaccgaaatttacgactacctgcgcctactgtttgcccgtgtcggtgagccgcgctgc
ccaacccacggccagccactcgccgcgcaaaccatcagtcagatggtagataaagtgctt
gagatgccagaagacagccgcctgatgctgctagcgccagtcgttaatggtcgaaagggt
gaacacgttaaattactagagggcttatcggcgcagggctatatccgcgcccgtatcgat
ggcgaagtgtgcgacctaagcgatccaccaacgttagacctacacgttaagcacaccatc
gaagtggtcgtcgaccgttttaaagtgcgcagcgatatccagcagcgtctggccgaatcc
tttgaaaccgcgctcgaactctcgggcgggattgcggttgtcgccagtatggatgaaggt
gcaaccgaagaactggtgttctccgcaaactttgcctgtccacactgcggctattcgatg
gcagagctcgagccacggattttctcctttaacaacccggccggcgcctgcccgacctgt
gatggtttaggggtacagcaatttttcgacccagagcgcgtcatcactaaccccgaattg
tccttagcaggcggcgcgatccgcggctgggatagacgcaacttctattacttccaaatg
ctcacttcgctggccgagcattataagttcgatgtcgaagtacctttcgaacaactgacc
gataaagtcagaaagattgtcctctacggctcaggcaacgacagcattgcctttaaatac
attaatgaccgtggcgatgtggtggtgcgtaatcaccccttcgaaggcattttaaataat
atggacagacgctaccgcgaaaccgagagtaactcggtgcgcgaagagctggccaaattt
atcaacacccaggcctgccaaagctgcggcggttcacgtctgcgcgaagaggcccgtaac
gtatttattggcgatctcaacctgccaaaactcacgatgtggtcgattggcgaagcatta
gcgtacttcgagaaactcgagtttagcggccaaagggcgcagatcgccgagaaggtactc
aaagaagttcgcgatcgcttagggttcctcgtgaatgtcggccttaactatttaagtctg
tcacgctccgccgaaaccctgtcgggcggagaagcgcagcgtattcgcctcgccagccaa
atcggcgcgggactggttggggtaatgtacgtactggatgagccgtccattggtttgcac
cagcgggataacgagcgattattgcaaacccttatccacctgcgggatttaggaaatacc
gtgattgtggttgagcacgacgaagatgcgattcgtatcgccgaccatattgtggatatt
ggccctggcgctggcgtccacggcggtgaagtaatatgcgacggcccgctagagaaaatc
gttgcctgcgacgagtcggttacagggcaatatatttcgggtagacgcaatatccatatc
agtacgccgcgtacacccttcgatcctaagcaagtgattgaactctttggtgcccgtggc
aataacctgcgcaatgtagacttaaccgtacccgtaggcttatttacctgtgtgacaggc
gtgtctggctcgggtaaatcgacgctgattaacgacactttcttcaagattgcccataag
ctattgaacggcgccaccgtcgatgagcctgcgccctacgataagattgttggcatggag
caatgcgataaagtggtcgatatcgaccagagtccgattggccgcacaccgcgctcaaac
cctgcaacctacacgggtatctttacccccatccgcgaaatctttgccggaacgcaggaa
tcccgcacccgcggctatcaggttggtcgcttctcctttaacgttaagggcggtcgctgc
gaagcctgtcagggcgatggattaattaaagtagaaatgcacttcctgcccgatgtctat
gtgccctgcgatgcctgtaagggcaaacgctacaaccgcgagaccttagaggtgcgctat
aagggcaagaacatccacgaagtactgcagatgacggttgaagatgcgcgggagtttttc
gacgctgtgccagcgattgcccgtaaactccaaaccctgatggacgtgggtttatcctac
gttcgcttaggtcaaagcgcgaccacactctcgggtggtgaagcgcaaagggtgaagctc
gcgaaggaactctccaagcgcgacacgggtaagaccttgtatatcttagatgagccgaca
acgggtctgcactttgccgatatccaattactgctcgatgtactccatcgcctcaaatcc
cacggcaatactatcgtggtgattgagcataacttagacgtgattaaaaccgcagactgg
attatcgacctaggccctgagggcggcgctggcggcggcactatcctagcaacgggtacg
ccggatgaagtagcgcagcatccaacctcacacacggcgcgcttcctaaagccgctgctc
gaacgggatgcccttttagcggcaaagaaataa
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