Shewanella acanthi: K0H61_16635
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Entry
K0H61_16635 CDS
T09152
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
sach
Shewanella acanthi
Brite
KEGG Orthology (KO) [BR:
sach00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sach03021
]
K0H61_16635 (rpoH)
Transcription machinery [BR:
sach03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K0H61_16635 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Fe_dep_repress
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
QYJ78681
LinkDB
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Position
complement(3877800..3878657)
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AA seq
285 aa
AA seq
DB search
MTFQTQSMALTVPQGSSSLEAYIHSVTSITMLDAETEYELAKRLQETGDLQAAKQLIMSH
LRFVVHVAKGYSGYGLPQADLIQEGNIGLMKAVKRFDPDVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNIRKAKTRLGWFSDDEVAMVAENLGVSKADVTEMESRMAA
QDPSFDLSSDNDDEQDFAPVHYLEDHSSDLAENIENDNWESNAQGRLLSAIKTLDERSQH
ILRARWLDDDKTTLQELAETYQVSAERIRQLEKNAMNKLKACMEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacctttcaaacgcaatcaatggcactcactgtcccgcaaggtagcagtagtttagag
gcttatatccattcagtgactagcattaccatgctggacgctgagactgagtatgagtta
gccaaacgtttgcaggaaacgggtgatctgcaggctgcgaagcaactgattatgtcgcac
ctgcgttttgttgtgcacgttgctaagggctactcaggttacggcctaccacaggctgac
cttatccaagaaggtaatatcggtctgatgaaagcggttaaacgcttcgatcccgatgtg
ggcgtgcgtctagtgtccttcgcggtacactggatcaaagccgaaattcatgaatatgtg
ctgaaaaactggcgcatagttaaagtggctaccactaaagcgcagcgtaagttgttcttt
aatatccgtaaagctaagactcgtctgggctggttcagcgatgatgaagtggcaatggtg
gccgaaaacctaggcgtatctaaggccgatgtgaccgaaatggagtcacgtatggcggcg
caggatccatcattcgatctcagtagcgataacgatgatgagcaagattttgctcctgta
cattacctagaagaccattcatccgacttagctgaaaacatcgaaaacgataactgggaa
tccaatgcccaaggccgtttattatcagcaatcaaaaccttagacgagcgtagccagcac
attttgcgcgcccgttggttagatgatgataagacgacgctgcaggaattagcagagacc
tatcaagtatccgctgagcgtattcgccagttagaaaagaacgcgatgaataagcttaag
gcctgtatggaagcttaa
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